Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MIR4639-201ENST00000584938 69 ntBASIC0.96□□□□□ -2.26
R3HCC1Q9Y3T6 AC244669.1-204ENST00000621564 178 ntBASIC0.96□□□□□ -2.26
R3HCC1Q9Y3T6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 Y_RNA.96-201ENST00000363092 109 ntBASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 RNU6-110P-201ENST00000384508 104 ntBASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 snoU13.11-201ENST00000459219 104 ntBASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 RNA5SP47-201ENST00000517230 109 ntBASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 MIR4452-201ENST00000583004 71 ntBASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 MIR2052-201ENST00000636055 55 ntBASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.95□□□□□ -2.26
R3HCC1Q9Y3T6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 SNORA36.1-201ENST00000363424 132 ntBASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 RNA5SP403-201ENST00000363598 108 ntBASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 SNORD114-2-201ENST00000363953 78 ntBASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 Y_RNA.290-201ENST00000364879 114 ntBASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 MIR140-201ENST00000385282 100 ntBASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.94□□□□□ -2.26
R3HCC1Q9Y3T6 RNU6-957P-201ENST00000363652 99 ntBASIC0.93□□□□□ -2.26
R3HCC1Q9Y3T6 SNORD114-22-201ENST00000365423 72 ntBASIC0.93□□□□□ -2.26
R3HCC1Q9Y3T6 MIR488-201ENST00000365739 83 ntBASIC0.93□□□□□ -2.26
R3HCC1Q9Y3T6 MIR489-201ENST00000384923 84 ntBASIC0.93□□□□□ -2.26
R3HCC1Q9Y3T6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.93□□□□□ -2.26
R3HCC1Q9Y3T6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.92□□□□□ -2.26
R3HCC1Q9Y3T6 MIR518E-201ENST00000385252 88 ntBASIC0.92□□□□□ -2.26
R3HCC1Q9Y3T6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.92□□□□□ -2.26
R3HCC1Q9Y3T6 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
R3HCC1Q9Y3T6 Y_RNA.190-201ENST00000363964 101 ntBASIC0.91□□□□□ -2.26
R3HCC1Q9Y3T6 Y_RNA.648-201ENST00000459455 110 ntBASIC0.91□□□□□ -2.26
R3HCC1Q9Y3T6 RNU6-1265P-201ENST00000516342 103 ntBASIC0.91□□□□□ -2.26
R3HCC1Q9Y3T6 TRDV1-202ENST00000621643 102 ntBASIC0.91□□□□□ -2.26
R3HCC1Q9Y3T6 MIR6866-201ENST00000638146 69 ntBASIC0.91□□□□□ -2.26
R3HCC1Q9Y3T6 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
R3HCC1Q9Y3T6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
R3HCC1Q9Y3T6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.9□□□□□ -2.27
R3HCC1Q9Y3T6 RNU7-104P-201ENST00000459398 79 ntBASIC0.9□□□□□ -2.27
R3HCC1Q9Y3T6 RNU6-351P-201ENST00000516097 100 ntBASIC0.9□□□□□ -2.27
R3HCC1Q9Y3T6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.9□□□□□ -2.27
R3HCC1Q9Y3T6 MALAT1.1-201ENST00000618249 95 ntBASIC0.9□□□□□ -2.27
R3HCC1Q9Y3T6 SNORD116-10-201ENST00000363791 102 ntBASIC0.89□□□□□ -2.27
R3HCC1Q9Y3T6 RNU7-85P-201ENST00000458851 63 ntBASIC0.89□□□□□ -2.27
R3HCC1Q9Y3T6 MIR6828-201ENST00000636181 60 ntBASIC0.89□□□□□ -2.27
R3HCC1Q9Y3T6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 RNA5SP517-201ENST00000364724 117 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 Y_RNA.283-201ENST00000364798 112 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 MIR520E-201ENST00000384867 87 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 MTATP6P29-201ENST00000415057 132 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 AL078603.1-201ENST00000603824 313 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 U6.100-201ENST00000636230 99 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
R3HCC1Q9Y3T6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
R3HCC1Q9Y3T6 RNU6-466P-201ENST00000391224 103 ntBASIC0.87□□□□□ -2.27
R3HCC1Q9Y3T6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.87□□□□□ -2.27
R3HCC1Q9Y3T6 snoU13.18-201ENST00000459483 104 ntBASIC0.86□□□□□ -2.27
R3HCC1Q9Y3T6 RPS29P1-201ENST00000465274 159 ntBASIC0.86□□□□□ -2.27
R3HCC1Q9Y3T6 RNU6-75P-201ENST00000515944 104 ntBASIC0.86□□□□□ -2.27
R3HCC1Q9Y3T6 AL590095.2-201ENST00000604136 117 ntBASIC0.86□□□□□ -2.27
R3HCC1Q9Y3T6 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
R3HCC1Q9Y3T6 SNORA8.2-201ENST00000384372 139 ntBASIC0.85□□□□□ -2.27
R3HCC1Q9Y3T6 RNA5SP268-201ENST00000516828 124 ntBASIC0.85□□□□□ -2.27
R3HCC1Q9Y3T6 AC092634.7-201ENST00000621022 103 ntBASIC0.85□□□□□ -2.27
R3HCC1Q9Y3T6 AC067863.3-201ENST00000624172 122 ntBASIC0.85□□□□□ -2.27
R3HCC1Q9Y3T6 RNU6-726P-201ENST00000364680 107 ntBASIC0.84□□□□□ -2.27
R3HCC1Q9Y3T6 RNY1P7-201ENST00000384743 110 ntBASIC0.84□□□□□ -2.27
R3HCC1Q9Y3T6 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 RNY4P30-201ENST00000410216 95 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 SNORD4B-201ENST00000459083 72 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 RNA5SP227-201ENST00000516184 113 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 RNA5SP220-201ENST00000516298 104 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 AC026421.1-201ENST00000519101 163 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 MIR3920-201ENST00000581751 86 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-1131P-201ENST00000364955 107 ntBASIC0.82□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-49P-201ENST00000384256 107 ntBASIC0.82□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-519P-201ENST00000410590 108 ntBASIC0.82□□□□□ -2.28
R3HCC1Q9Y3T6 Y_RNA.609-201ENST00000410669 89 ntBASIC0.82□□□□□ -2.28
R3HCC1Q9Y3T6 RNU7-13P-201ENST00000516413 62 ntBASIC0.82□□□□□ -2.28
R3HCC1Q9Y3T6 MIR6734-201ENST00000621166 68 ntBASIC0.82□□□□□ -2.28
R3HCC1Q9Y3T6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.81□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-945P-201ENST00000383947 107 ntBASIC0.81□□□□□ -2.28
R3HCC1Q9Y3T6 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
R3HCC1Q9Y3T6 MIR4536-1-201ENST00000583537 88 ntBASIC0.81□□□□□ -2.28
R3HCC1Q9Y3T6 SNORD41.1-201ENST00000391000 69 ntBASIC0.8□□□□□ -2.28
R3HCC1Q9Y3T6 MIR548L-201ENST00000408303 86 ntBASIC0.8□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-65P-201ENST00000516332 98 ntBASIC0.8□□□□□ -2.28
R3HCC1Q9Y3T6 MTRNR2L2-201ENST00000604882 87 ntBASIC0.8□□□□□ -2.28
R3HCC1Q9Y3T6 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-1298P-201ENST00000362456 101 ntBASIC0.79□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-42P-201ENST00000384165 107 ntBASIC0.79□□□□□ -2.28
R3HCC1Q9Y3T6 Y_RNA.596-201ENST00000410462 109 ntBASIC0.79□□□□□ -2.28
R3HCC1Q9Y3T6 Y_RNA.694-201ENST00000516677 117 ntBASIC0.79□□□□□ -2.28
R3HCC1Q9Y3T6 MIR548AG2-201ENST00000581228 64 ntBASIC0.79□□□□□ -2.28
R3HCC1Q9Y3T6 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
R3HCC1Q9Y3T6 AC022709.1-201ENST00000615967 87 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms