Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 Y_RNA.809-201ENST00000516058 95 ntBASIC0.51□□□□□ -2.33
MRPS28Q9Y2Q9 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-135P-201ENST00000516769 101 ntBASIC0.51□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-158P-201ENST00000517104 100 ntBASIC0.51□□□□□ -2.33
MRPS28Q9Y2Q9 Y_RNA.81-201ENST00000362997 102 ntBASIC0.5□□□□□ -2.33
MRPS28Q9Y2Q9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.5□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-813P-201ENST00000384691 107 ntBASIC0.5□□□□□ -2.33
MRPS28Q9Y2Q9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.5□□□□□ -2.33
MRPS28Q9Y2Q9 MIR4714-201ENST00000580728 77 ntBASIC0.5□□□□□ -2.33
MRPS28Q9Y2Q9 AC025521.1-201ENST00000621624 286 ntBASIC0.5□□□□□ -2.33
MRPS28Q9Y2Q9 SNORD115-24-201ENST00000363528 82 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-153P-201ENST00000364422 104 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 SNORA36.2-201ENST00000384004 127 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-1113P-201ENST00000384348 107 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 AL513043.2-201ENST00000573941 143 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 AP001318.4-201ENST00000616637 121 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
MRPS28Q9Y2Q9 Y_RNA.93-201ENST00000363066 109 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-726P-201ENST00000364680 107 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-524P-201ENST00000384270 107 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 SNORA8.2-201ENST00000384372 139 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 AC103810.7-201ENST00000607821 91 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
MRPS28Q9Y2Q9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 SNORD118-201ENST00000363593 134 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-1125P-201ENST00000363601 107 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-480P-201ENST00000384332 107 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 SNORD41.1-201ENST00000391000 69 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-644P-201ENST00000391155 98 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 MTATP8P2-201ENST00000435212 202 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 RNU6-469P-201ENST00000516253 101 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 MIR7107-201ENST00000611489 80 ntBASIC0.47□□□□□ -2.33
MRPS28Q9Y2Q9 Y_RNA.107-201ENST00000363190 121 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-640P-201ENST00000363693 105 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.544-201ENST00000384650 113 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 AL161932.1-201ENST00000437408 146 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 RNU7-85P-201ENST00000458851 63 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 snoU13.11-201ENST00000459219 104 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-75P-201ENST00000515944 104 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 RNA5SP268-201ENST00000516828 124 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 MIR3920-201ENST00000581751 86 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 AC022709.1-201ENST00000615967 87 ntBASIC0.46□□□□□ -2.34
MRPS28Q9Y2Q9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-957P-201ENST00000363652 99 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 SNORD58A-201ENST00000383875 65 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-905P-201ENST00000384434 107 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-243P-201ENST00000391140 107 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.648-201ENST00000459455 110 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 RNU7-61P-201ENST00000515897 61 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 MIR548AG2-201ENST00000581228 64 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 RNU1-29P-201ENST00000606574 126 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.45□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.495-201ENST00000384435 112 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-887P-201ENST00000410660 100 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.705-201ENST00000516862 110 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 SNORA25.18-201ENST00000607153 114 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 MIR6515-201ENST00000619843 57 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 TRDV1-202ENST00000621643 102 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 AL162376.1-201ENST00000624117 175 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 U6.100-201ENST00000636230 99 ntBASIC0.44□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.283-201ENST00000364798 112 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.290-201ENST00000364879 114 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-32P-201ENST00000383948 107 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-13P-201ENST00000384248 107 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-12P-201ENST00000384604 107 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-41P-201ENST00000384741 107 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-972P-201ENST00000391208 107 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 RNU7-104P-201ENST00000459398 79 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
MRPS28Q9Y2Q9 Y_RNA.118-201ENST00000363300 101 ntBASIC0.42□□□□□ -2.34
MRPS28Q9Y2Q9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.42□□□□□ -2.34
MRPS28Q9Y2Q9 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
MRPS28Q9Y2Q9 U7.3-201ENST00000616123 62 ntBASIC0.42□□□□□ -2.34
MRPS28Q9Y2Q9 MIR488-201ENST00000365739 83 ntBASIC0.41□□□□□ -2.34
MRPS28Q9Y2Q9 RNA5SP89-201ENST00000410300 108 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 297.5 ms