Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RNU6-726P-201ENST00000364680 107 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-476P-201ENST00000384726 107 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 SNORA19-201ENST00000384737 128 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 MIR1197-201ENST00000408818 88 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 RNU4-61P-201ENST00000411243 107 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 AC097635.1-201ENST00000450678 155 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 RNA5SP227-201ENST00000516184 113 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-90P-201ENST00000606352 106 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 RNU1-29P-201ENST00000606574 126 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 MIR6755-201ENST00000619993 66 ntBASIC0.39□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-524P-201ENST00000384270 107 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 MIR519A1-201ENST00000385257 85 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-1064P-201ENST00000410626 104 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 AC109327.2-201ENST00000448339 378 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 RNU7-104P-201ENST00000459398 79 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 Y_RNA.809-201ENST00000516058 95 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-479P-201ENST00000516348 105 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-62P-201ENST00000516526 102 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 MIR4694-201ENST00000578534 80 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 MIR4514-201ENST00000581410 57 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
ECHDC1Q9NTX5 SNORD36A-201ENST00000362874 73 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-1107P-201ENST00000364817 104 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 Y_RNA.323-201ENST00000365157 109 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 Y_RNA.377-201ENST00000365644 108 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-1014P-201ENST00000383940 103 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-880P-201ENST00000384526 107 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 RNU7-10P-201ENST00000607194 63 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 AL109933.3-201ENST00000619095 188 ntBASIC0.37□□□□□ -2.35
ECHDC1Q9NTX5 RNY3P2-201ENST00000362918 102 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-1260P-201ENST00000362944 107 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 SNORD38.2-201ENST00000384470 69 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-863P-201ENST00000515989 104 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-313P-201ENST00000516317 112 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 SNORA62.5-201ENST00000516634 120 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-135P-201ENST00000516769 101 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 RNU6-86P-201ENST00000606534 107 ntBASIC0.36□□□□□ -2.35
ECHDC1Q9NTX5 Y_RNA.57-201ENST00000362806 113 ntBASIC0.35□□□□□ -2.35
ECHDC1Q9NTX5 RNU2-51P-201ENST00000410708 197 ntBASIC0.35□□□□□ -2.35
ECHDC1Q9NTX5 U2.22-201ENST00000636441 106 ntBASIC0.35□□□□□ -2.35
ECHDC1Q9NTX5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
ECHDC1Q9NTX5 Y_RNA.467-201ENST00000384297 102 ntBASIC0.34□□□□□ -2.36
ECHDC1Q9NTX5 MIR181B2-201ENST00000385004 89 ntBASIC0.34□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-589P-201ENST00000516485 107 ntBASIC0.34□□□□□ -2.36
ECHDC1Q9NTX5 MIR3920-201ENST00000581751 86 ntBASIC0.34□□□□□ -2.36
ECHDC1Q9NTX5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.34□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-1244P-201ENST00000363614 108 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-1126P-201ENST00000384002 107 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-815P-201ENST00000384080 113 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-269P-201ENST00000391077 97 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 Y_RNA.659-201ENST00000515994 113 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-795P-201ENST00000516323 103 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-1265P-201ENST00000516342 103 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 MIR548AG2-201ENST00000581228 64 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 MIR4777-201ENST00000583710 86 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 AC012531.4-201ENST00000616509 177 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 AC025521.1-201ENST00000621624 286 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 AL162376.1-201ENST00000624117 175 ntBASIC0.33□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-957P-201ENST00000363652 99 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-106P-201ENST00000384405 107 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 SNORD41.1-201ENST00000391000 69 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-1254P-201ENST00000391266 104 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 snoU13.11-201ENST00000459219 104 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-789P-201ENST00000517105 102 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 AC141557.1-201ENST00000540982 400 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 SNORA70.25-201ENST00000612741 95 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 AC067863.3-201ENST00000624172 122 ntBASIC0.32□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-1290P-201ENST00000362957 109 ntBASIC0.31□□□□□ -2.36
ECHDC1Q9NTX5 Y_RNA.163-201ENST00000363702 113 ntBASIC0.31□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-554P-201ENST00000410466 106 ntBASIC0.31□□□□□ -2.36
ECHDC1Q9NTX5 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-537P-201ENST00000517277 103 ntBASIC0.31□□□□□ -2.36
ECHDC1Q9NTX5 U6.100-201ENST00000636230 99 ntBASIC0.31□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-1056P-201ENST00000383996 107 ntBASIC0.3□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-243P-201ENST00000391140 107 ntBASIC0.3□□□□□ -2.36
ECHDC1Q9NTX5 uc_338.28-201ENST00000612082 187 ntBASIC0.3□□□□□ -2.36
ECHDC1Q9NTX5 MIR590-201ENST00000385008 97 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 MIR548L-201ENST00000408303 86 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-904P-201ENST00000516206 101 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-109P-201ENST00000516364 107 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-412P-201ENST00000516434 106 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-184P-201ENST00000516514 107 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 AC096720.1-201ENST00000604441 183 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 TRDV1-202ENST00000621643 102 ntBASIC0.29□□□□□ -2.36
ECHDC1Q9NTX5 Y_RNA.78-201ENST00000362970 110 ntBASIC0.28□□□□□ -2.36
ECHDC1Q9NTX5 Y_RNA.95-201ENST00000363079 95 ntBASIC0.28□□□□□ -2.36
ECHDC1Q9NTX5 Y_RNA.709-201ENST00000516952 92 ntBASIC0.28□□□□□ -2.36
ECHDC1Q9NTX5 RNU6-834P-201ENST00000362367 110 ntBASIC0.27□□□□□ -2.37
ECHDC1Q9NTX5 RNA5SP257-201ENST00000363023 116 ntBASIC0.27□□□□□ -2.37
ECHDC1Q9NTX5 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms