Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.94□□□□□ -2.56
VCX3AQ9NNX9 MT-TQ-201ENST00000387372 72 ntBASIC-0.94□□□□□ -2.56
VCX3AQ9NNX9 SNORD127-201ENST00000458892 86 ntBASIC-0.94□□□□□ -2.56
VCX3AQ9NNX9 MTATP8P1-201ENST00000467115 207 ntBASIC-0.94□□□□□ -2.56
VCX3AQ9NNX9 RNU6-762P-201ENST00000517107 102 ntBASIC-0.94□□□□□ -2.56
VCX3AQ9NNX9 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.95□□□□□ -2.56
VCX3AQ9NNX9 RNU6-235P-201ENST00000362644 107 ntBASIC-0.95□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.95□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.95□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.95□□□□□ -2.56
VCX3AQ9NNX9 MIR548G-201ENST00000408442 89 ntBASIC-0.95□□□□□ -2.56
VCX3AQ9NNX9 MIR5589-201ENST00000579442 60 ntBASIC-0.95□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 SNORD38.1-201ENST00000363863 68 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 RNU6-918P-201ENST00000391219 106 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 SNORA7.5-201ENST00000410672 110 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 RNU6-90P-201ENST00000606352 106 ntBASIC-0.96□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 MIR517B-201ENST00000385102 67 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 SNORD58.1-201ENST00000391313 66 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 AC022137.1-201ENST00000483735 151 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 MIR6854-201ENST00000614935 69 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 AC021753.1-201ENST00000635724 168 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 MIR3658-201ENST00000636291 56 ntBASIC-0.97□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 RNU6-312P-201ENST00000364629 107 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 MIR604-201ENST00000384880 94 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 MIR451A-201ENST00000385059 72 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 MIR1912-201ENST00000410389 80 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 AP000533.3-201ENST00000447704 118 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 snoU13.11-201ENST00000459219 104 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 AP002392.1-201ENST00000537692 208 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 MIR8068-201ENST00000618032 68 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 AL512310.12-203ENST00000640543 90 ntBASIC-0.98□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 SNORD114-4-201ENST00000363962 75 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 RNY1P7-201ENST00000384743 110 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 SNORD37.2-201ENST00000391075 66 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 MIR548F4-201ENST00000408515 105 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 AL353813.1-201ENST00000440700 253 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 IGKV1-22-201ENST00000524313 326 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 MIR6779-201ENST00000617283 64 ntBASIC-0.99□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.213-201ENST00000364178 111 ntBASIC-1□□□□□ -2.57
VCX3AQ9NNX9 MIR224-201ENST00000384889 81 ntBASIC-1□□□□□ -2.57
VCX3AQ9NNX9 RNU6-592P-201ENST00000411333 103 ntBASIC-1□□□□□ -2.57
VCX3AQ9NNX9 MTCYBP6-201ENST00000441810 138 ntBASIC-1□□□□□ -2.57
VCX3AQ9NNX9 RNU6-1219P-201ENST00000516143 112 ntBASIC-1□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.673-201ENST00000516306 88 ntBASIC-1□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.01□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.01□□□□□ -2.57
VCX3AQ9NNX9 SNORD74.6-201ENST00000364796 70 ntBASIC-1.01□□□□□ -2.57
VCX3AQ9NNX9 SNORD83B-201ENST00000386745 93 ntBASIC-1.01□□□□□ -2.57
VCX3AQ9NNX9 RNU6-239P-201ENST00000390990 99 ntBASIC-1.01□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 U3.27-201ENST00000391237 200 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 SNORD42B-201ENST00000458893 67 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 RNU4-71P-201ENST00000516258 113 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 RNU7-121P-201ENST00000516604 62 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 MIR6773-201ENST00000612812 74 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 snoR1.1-201ENST00000628177 80 ntBASIC-1.02□□□□□ -2.57
VCX3AQ9NNX9 RNU6-363P-201ENST00000362895 105 ntBASIC-1.03□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.03□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.03□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.03□□□□□ -2.57
VCX3AQ9NNX9 RNU6-905P-201ENST00000384434 107 ntBASIC-1.03□□□□□ -2.57
VCX3AQ9NNX9 MIR548D2-201ENST00000384955 97 ntBASIC-1.03□□□□□ -2.57
VCX3AQ9NNX9 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.03□□□□□ -2.57
VCX3AQ9NNX9 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.04□□□□□ -2.58
VCX3AQ9NNX9 SNORD115-23-201ENST00000364461 82 ntBASIC-1.04□□□□□ -2.58
VCX3AQ9NNX9 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.04□□□□□ -2.58
VCX3AQ9NNX9 MIRLET7B-201ENST00000385140 83 ntBASIC-1.04□□□□□ -2.58
VCX3AQ9NNX9 MIR759-201ENST00000390224 91 ntBASIC-1.04□□□□□ -2.58
VCX3AQ9NNX9 RNU6-75P-201ENST00000515944 104 ntBASIC-1.04□□□□□ -2.58
VCX3AQ9NNX9 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.05□□□□□ -2.58
VCX3AQ9NNX9 SNORA63.6-201ENST00000364921 119 ntBASIC-1.05□□□□□ -2.58
VCX3AQ9NNX9 AL500527.2-201ENST00000454105 95 ntBASIC-1.05□□□□□ -2.58
VCX3AQ9NNX9 AC074198.2-201ENST00000508153 258 ntBASIC-1.05□□□□□ -2.58
VCX3AQ9NNX9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.05□□□□□ -2.58
VCX3AQ9NNX9 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.05□□□□□ -2.58
VCX3AQ9NNX9 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.06□□□□□ -2.58
VCX3AQ9NNX9 RNU6-409P-201ENST00000384114 104 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 598 ms