Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHISA4Q96DD7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHISA4Q96DD7 SNORD113.3-201ENST00000364630 78 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 MIR520H-201ENST00000385126 88 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 SNORD90-201ENST00000391145 111 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 FGF7P7-201ENST00000514120 227 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 RNU6-448P-201ENST00000517052 107 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 AC104996.3-201ENST00000590718 94 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 AC013244.2-201ENST00000603396 103 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 MIR6788-201ENST00000618842 66 ntBASIC1.64□□□□□ -2.15
SHISA4Q96DD7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 RNU6-411P-201ENST00000384451 107 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SHISA4Q96DD7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 RNU6-75P-201ENST00000515944 104 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 RNU6-165P-201ENST00000517170 99 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 AL512310.8-201ENST00000550183 120 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 MIR3064-201ENST00000581130 66 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 MIR6082-201ENST00000613604 109 ntBASIC1.63□□□□□ -2.15
SHISA4Q96DD7 Y_RNA.56-201ENST00000362798 112 ntBASIC1.62□□□□□ -2.15
SHISA4Q96DD7 RNU6-934P-201ENST00000365154 107 ntBASIC1.62□□□□□ -2.15
SHISA4Q96DD7 Y_RNA.491-201ENST00000384417 107 ntBASIC1.62□□□□□ -2.15
SHISA4Q96DD7 RNU6-540P-201ENST00000384622 101 ntBASIC1.62□□□□□ -2.15
SHISA4Q96DD7 MIR934-201ENST00000401241 83 ntBASIC1.62□□□□□ -2.15
SHISA4Q96DD7 AC125388.1-201ENST00000459631 156 ntBASIC1.62□□□□□ -2.15
SHISA4Q96DD7 AC068338.1-201ENST00000565567 176 ntBASIC1.62□□□□□ -2.15
SHISA4Q96DD7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.62□□□□□ -2.15
SHISA4Q96DD7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 RNU6-957P-201ENST00000363652 99 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 RNU6-132P-201ENST00000383863 107 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 MIR519A1-201ENST00000385257 85 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 MIR548J-201ENST00000408833 112 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 RNA5SP436-201ENST00000516020 115 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 RNU6-765P-201ENST00000516916 99 ntBASIC1.61□□□□□ -2.15
SHISA4Q96DD7 Y_RNA.264-201ENST00000364665 102 ntBASIC1.6□□□□□ -2.15
SHISA4Q96DD7 SNORD83.1-201ENST00000411362 77 ntBASIC1.6□□□□□ -2.15
SHISA4Q96DD7 RNU7-195P-201ENST00000458793 62 ntBASIC1.6□□□□□ -2.15
SHISA4Q96DD7 TRAJ51-201ENST00000504127 63 ntBASIC1.6□□□□□ -2.15
SHISA4Q96DD7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.6□□□□□ -2.15
SHISA4Q96DD7 RNU6-70P-201ENST00000516438 60 ntBASIC1.6□□□□□ -2.15
SHISA4Q96DD7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHISA4Q96DD7 MIR125B2-201ENST00000385128 89 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 RNU1-78P-201ENST00000391248 165 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 SNORD111-201ENST00000408139 94 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 RNU6-634P-201ENST00000459134 106 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 snoU13.21-201ENST00000459368 105 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 AC048334.1-201ENST00000477975 159 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 RN7SKP88-201ENST00000516847 250 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 AC036111.3-201ENST00000526389 112 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 7SK.8-201ENST00000612110 250 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 7SK.11-201ENST00000615477 250 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 7SK.13-201ENST00000622040 250 ntBASIC1.59□□□□□ -2.15
SHISA4Q96DD7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SHISA4Q96DD7 MIRLET7F1-201ENST00000362202 87 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 RNU6-1260P-201ENST00000362944 107 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 SNORD77.2-201ENST00000391045 68 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SHISA4Q96DD7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
SHISA4Q96DD7 AC092628.1-201ENST00000436250 252 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 snoU13.17-201ENST00000458802 104 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 MIR4771-2-201ENST00000577758 74 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 MIR4771-1-201ENST00000582617 74 ntBASIC1.58□□□□□ -2.16
SHISA4Q96DD7 RNU6-330P-201ENST00000363015 107 ntBASIC1.57□□□□□ -2.16
SHISA4Q96DD7 SNORD115-31-201ENST00000365318 82 ntBASIC1.57□□□□□ -2.16
SHISA4Q96DD7 AC015818.7-201ENST00000428754 109 ntBASIC1.57□□□□□ -2.16
SHISA4Q96DD7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.57□□□□□ -2.16
SHISA4Q96DD7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
SHISA4Q96DD7 Y_RNA.30-201ENST00000362572 97 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 AL591704.2-201ENST00000421658 181 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 AC074348.1-201ENST00000426503 132 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 MIR2113-201ENST00000459007 91 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 RNU6-807P-201ENST00000516805 107 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 RNU7-156P-201ENST00000517214 74 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 AC138907.6-201ENST00000568401 126 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 AC138869.1-201ENST00000568623 124 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 MIR3660-201ENST00000584845 100 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.56□□□□□ -2.16
SHISA4Q96DD7 AC106800.4-201ENST00000614905 153 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.56□□□□□ -2.16
SHISA4Q96DD7 RNU6-208P-201ENST00000362431 107 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 Y_RNA.239-201ENST00000364444 113 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 RNU6-649P-201ENST00000384463 107 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 RNU6-800P-201ENST00000384473 103 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 SNORA75.2-201ENST00000391138 150 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 SNORA75.3-201ENST00000391231 150 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 RPS26P5-201ENST00000418544 335 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 AC097635.1-201ENST00000450678 155 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 RNU6-871P-201ENST00000516122 100 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 TRDV1-202ENST00000621643 102 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 MIR1297-201ENST00000637311 77 ntBASIC1.55□□□□□ -2.16
SHISA4Q96DD7 RNU5F-1-201ENST00000362507 117 ntBASIC1.54□□□□□ -2.16
SHISA4Q96DD7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.54□□□□□ -2.16
SHISA4Q96DD7 Y_RNA.178-201ENST00000363832 102 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 350.4 ms