Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
SYNE4Q8N205 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
SYNE4Q8N205 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
SYNE4Q8N205 MIR6082-201ENST00000613604 109 ntBASIC1.32□□□□□ -2.2
SYNE4Q8N205 Y_RNA.42-201ENST00000362660 108 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 RNU4-58P-201ENST00000363192 141 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 RNU6-132P-201ENST00000383863 107 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 MIR519C-201ENST00000385053 87 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNE4Q8N205 RNA5SP292-201ENST00000390974 118 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 AL591704.2-201ENST00000421658 181 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 Y_RNA.648-201ENST00000459455 110 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 AC106800.4-201ENST00000614905 153 ntBASIC1.31□□□□□ -2.2
SYNE4Q8N205 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE4Q8N205 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE4Q8N205 Y_RNA.94-201ENST00000363068 106 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 RNU6-957P-201ENST00000363652 99 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 MIR193B-201ENST00000384907 83 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 Y_RNA.607-201ENST00000410597 98 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.3□□□□□ -2.2
SYNE4Q8N205 RNU7-195P-201ENST00000458793 62 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 RNU6-857P-201ENST00000515893 110 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE4Q8N205 CYP3A137P-201ENST00000562436 69 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 AC008608.1-201ENST00000603910 127 ntBASIC1.3□□□□□ -2.2
SYNE4Q8N205 RNA5SP245-201ENST00000364239 121 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 Y_RNA.244-201ENST00000364484 109 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 Y_RNA.536-201ENST00000384621 113 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 MIR125B2-201ENST00000385128 89 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 SNORD90-201ENST00000391145 111 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 RNU6-1254P-201ENST00000391266 104 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 RNU6-279P-201ENST00000391297 101 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 AC140658.3-201ENST00000567603 271 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 MIR1273G-201ENST00000577677 100 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 MIR4676-201ENST00000583078 72 ntBASIC1.29□□□□□ -2.2
SYNE4Q8N205 Y_RNA.68-201ENST00000362881 102 ntBASIC1.28□□□□□ -2.2
SYNE4Q8N205 Y_RNA.283-201ENST00000364798 112 ntBASIC1.28□□□□□ -2.2
SYNE4Q8N205 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
SYNE4Q8N205 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SYNE4Q8N205 SNORA70.22-201ENST00000517160 124 ntBASIC1.28□□□□□ -2.2
SYNE4Q8N205 MIRLET7F1-201ENST00000362202 87 ntBASIC1.27□□□□□ -2.21
SYNE4Q8N205 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
SYNE4Q8N205 RPS26P5-201ENST00000418544 335 ntBASIC1.27□□□□□ -2.21
SYNE4Q8N205 AC092628.1-201ENST00000436250 252 ntBASIC1.27□□□□□ -2.21
SYNE4Q8N205 AC093729.1-201ENST00000513074 128 ntBASIC1.27□□□□□ -2.21
SYNE4Q8N205 RNU6-1194P-201ENST00000516208 104 ntBASIC1.27□□□□□ -2.21
SYNE4Q8N205 RNU7-156P-201ENST00000517214 74 ntBASIC1.27□□□□□ -2.21
SYNE4Q8N205 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.27□□□□□ -2.21
SYNE4Q8N205 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE4Q8N205 Y_RNA.115-201ENST00000363272 98 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 RNU6-478P-201ENST00000363904 110 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 RNU4-38P-201ENST00000364472 129 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 RNU6-243P-201ENST00000391140 107 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 SNORA25.13-201ENST00000516395 103 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 Y_RNA.697-201ENST00000516776 113 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 RNU6-448P-201ENST00000517052 107 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 MIR4712-201ENST00000583750 82 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
SYNE4Q8N205 RNA5SP457-201ENST00000363657 124 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 Y_RNA.221-201ENST00000364248 96 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 RNU6-291P-201ENST00000384720 107 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 AL450471.1-201ENST00000447509 127 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 RNU7-102P-201ENST00000458948 62 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 MIR3064-201ENST00000581130 66 ntBASIC1.25□□□□□ -2.21
SYNE4Q8N205 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SYNE4Q8N205 MIR101-2-201ENST00000362195 79 ntBASIC1.24□□□□□ -2.21
SYNE4Q8N205 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
SYNE4Q8N205 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
SYNE4Q8N205 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SYNE4Q8N205 MIR4804-201ENST00000581683 73 ntBASIC1.24□□□□□ -2.21
SYNE4Q8N205 AL590095.2-201ENST00000604136 117 ntBASIC1.24□□□□□ -2.21
SYNE4Q8N205 MIR635-201ENST00000384830 98 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 MIR1236-201ENST00000408340 102 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 Y_RNA.681-201ENST00000516445 113 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 MIR4698-201ENST00000577795 80 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 MIR4536-1-201ENST00000583537 88 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 SNORD92-201ENST00000585078 85 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 U6.100-201ENST00000636230 99 ntBASIC1.23□□□□□ -2.21
SYNE4Q8N205 Y_RNA.56-201ENST00000362798 112 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 RNU6-811P-201ENST00000384069 107 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 MIR889-201ENST00000401280 79 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 Y_RNA.809-201ENST00000516058 95 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 SNORA18.5-201ENST00000516616 101 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 RNU6-765P-201ENST00000516916 99 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 MIR4796-201ENST00000580742 81 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 AC104996.3-201ENST00000590718 94 ntBASIC1.22□□□□□ -2.21
SYNE4Q8N205 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE4Q8N205 MIR532-201ENST00000385025 91 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 MIR519A1-201ENST00000385257 85 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 RNU6-466P-201ENST00000391224 103 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 RNU7-56P-201ENST00000458744 62 ntBASIC1.21□□□□□ -2.22
SYNE4Q8N205 RNU6-65P-201ENST00000516332 98 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms