Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-473P-201ENST00000516164 107 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 RNU6-1049P-201ENST00000516414 107 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 RNU6-1313P-201ENST00000362622 102 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.323-201ENST00000365157 109 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.362-201ENST00000365518 110 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 RNU6-409P-201ENST00000384114 104 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.586-201ENST00000391146 98 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 RNU6-1265P-201ENST00000516342 103 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 MIR3920-201ENST00000581751 86 ntBASIC0.07□□□□□ -2.4
NPHP3Q7Z494 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
NPHP3Q7Z494 AL157777.2-201ENST00000258070 137 ntBASIC0.06□□□□□ -2.4
NPHP3Q7Z494 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
NPHP3Q7Z494 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.346-201ENST00000365385 112 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.507-201ENST00000384500 99 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 MT-TR-201ENST00000387439 65 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 RNU6-816P-201ENST00000390914 107 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 RNU6-1268P-201ENST00000391214 107 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 RNU6-1239P-201ENST00000391310 107 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 RNU7-13P-201ENST00000516413 62 ntBASIC0.05□□□□□ -2.4
NPHP3Q7Z494 RNU6-774P-201ENST00000363238 107 ntBASIC0.04□□□□□ -2.4
NPHP3Q7Z494 MIR539-201ENST00000365690 78 ntBASIC0.04□□□□□ -2.4
NPHP3Q7Z494 MIR501-201ENST00000390204 84 ntBASIC0.04□□□□□ -2.4
NPHP3Q7Z494 MIR548G-201ENST00000408442 89 ntBASIC0.04□□□□□ -2.4
NPHP3Q7Z494 Z95118.1-201ENST00000421372 247 ntBASIC0.04□□□□□ -2.4
NPHP3Q7Z494 RNU6-1018P-201ENST00000516577 106 ntBASIC0.04□□□□□ -2.4
NPHP3Q7Z494 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.04□□□□□ -2.4
NPHP3Q7Z494 RNU6-90P-201ENST00000606352 106 ntBASIC0.04□□□□□ -2.4
NPHP3Q7Z494 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 SNORD38.1-201ENST00000363863 68 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.549-201ENST00000384657 102 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 RNA5SP25-201ENST00000410815 110 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 RNA5SP484-201ENST00000458857 111 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 NAMPTP3-201ENST00000569273 224 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 MIR5706-201ENST00000579841 80 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 MIR3133-201ENST00000583157 78 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 uc_338.28-201ENST00000612082 187 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 AL162726.3-218ENST00000636401 95 ntBASIC0.03□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.57-201ENST00000362806 113 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 RNU6-1201P-201ENST00000384227 107 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 RNU6-1254P-201ENST00000391266 104 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 AL161932.1-201ENST00000437408 146 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 AL442128.1-201ENST00000615151 90 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 AL035470.1-201ENST00000622571 220 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 AC073869.9-201ENST00000641610 120 ntBASIC0.02□□□□□ -2.41
NPHP3Q7Z494 SNORD36A-201ENST00000362874 73 ntBASIC0.01□□□□□ -2.41
NPHP3Q7Z494 Y_RNA.173-201ENST00000363776 113 ntBASIC0.01□□□□□ -2.41
NPHP3Q7Z494 Y_RNA.218-201ENST00000364218 104 ntBASIC0.01□□□□□ -2.41
NPHP3Q7Z494 RNU6-243P-201ENST00000391140 107 ntBASIC0.01□□□□□ -2.41
NPHP3Q7Z494 MIR548H2-201ENST00000408874 88 ntBASIC0.01□□□□□ -2.41
NPHP3Q7Z494 MIR548AG2-201ENST00000581228 64 ntBASIC0.01□□□□□ -2.41
NPHP3Q7Z494 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
NPHP3Q7Z494 SNORD110-201ENST00000408189 75 ntBASIC0□□□□□ -2.41
NPHP3Q7Z494 AC006210.1-201ENST00000424882 111 ntBASIC0□□□□□ -2.41
NPHP3Q7Z494 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0□□□□□ -2.41
NPHP3Q7Z494 AL627230.5-201ENST00000619807 58 ntBASIC0□□□□□ -2.41
NPHP3Q7Z494 RNU6-509P-201ENST00000363519 107 ntBASIC-0.01□□□□□ -2.41
NPHP3Q7Z494 RNU6-80P-201ENST00000384195 107 ntBASIC-0.01□□□□□ -2.41
NPHP3Q7Z494 MIR548A1-201ENST00000385041 97 ntBASIC-0.01□□□□□ -2.41
NPHP3Q7Z494 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.01□□□□□ -2.41
NPHP3Q7Z494 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
NPHP3Q7Z494 AC007012.1-201ENST00000567192 175 ntBASIC-0.01□□□□□ -2.41
NPHP3Q7Z494 MIR548AD-201ENST00000584780 82 ntBASIC-0.01□□□□□ -2.41
NPHP3Q7Z494 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.02□□□□□ -2.41
NPHP3Q7Z494 MIR145-201ENST00000384967 88 ntBASIC-0.02□□□□□ -2.41
NPHP3Q7Z494 HMGN2P22-201ENST00000427588 175 ntBASIC-0.02□□□□□ -2.41
NPHP3Q7Z494 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.02□□□□□ -2.41
NPHP3Q7Z494 MIR4677-201ENST00000584153 80 ntBASIC-0.02□□□□□ -2.41
NPHP3Q7Z494 TRDV1-202ENST00000621643 102 ntBASIC-0.02□□□□□ -2.41
NPHP3Q7Z494 MIR3914-2-201ENST00000637339 95 ntBASIC-0.02□□□□□ -2.41
NPHP3Q7Z494 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.03□□□□□ -2.41
NPHP3Q7Z494 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
NPHP3Q7Z494 MIR577-201ENST00000385196 96 ntBASIC-0.03□□□□□ -2.41
NPHP3Q7Z494 SNORD33.1-201ENST00000516213 88 ntBASIC-0.03□□□□□ -2.41
NPHP3Q7Z494 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.03□□□□□ -2.41
NPHP3Q7Z494 MIR3925-201ENST00000584674 77 ntBASIC-0.03□□□□□ -2.41
NPHP3Q7Z494 U7.6-201ENST00000610841 64 ntBASIC-0.03□□□□□ -2.41
NPHP3Q7Z494 RNU6-957P-201ENST00000363652 99 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 RNU1-141P-201ENST00000364623 158 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 RNU6-652P-201ENST00000365488 107 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 MIR519E-201ENST00000385075 84 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 RNU6-287P-201ENST00000516230 98 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 RNU6-659P-201ENST00000516454 104 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 IGLVI-20-201ENST00000519296 130 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 MIR4679-2-201ENST00000578358 77 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 U6.100-201ENST00000636230 99 ntBASIC-0.04□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.05□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.05□□□□□ -2.42
NPHP3Q7Z494 RNU7-74P-201ENST00000459104 62 ntBASIC-0.05□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.06□□□□□ -2.42
NPHP3Q7Z494 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.06□□□□□ -2.42
NPHP3Q7Z494 SNORA51.5-201ENST00000384126 131 ntBASIC-0.06□□□□□ -2.42
NPHP3Q7Z494 MIR617-201ENST00000385030 97 ntBASIC-0.06□□□□□ -2.42
NPHP3Q7Z494 MIR2113-201ENST00000459007 91 ntBASIC-0.06□□□□□ -2.42
NPHP3Q7Z494 AC068339.1-201ENST00000526965 141 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 334.9 ms