Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 SNORD18A-201ENST00000363753 72 ntBASIC1.06□□□□□ -2.24
ZNF394Q53GI3 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
ZNF394Q53GI3 MIR488-201ENST00000365739 83 ntBASIC1.06□□□□□ -2.24
ZNF394Q53GI3 RNU6-524P-201ENST00000384270 107 ntBASIC1.06□□□□□ -2.24
ZNF394Q53GI3 RNY4P30-201ENST00000410216 95 ntBASIC1.06□□□□□ -2.24
ZNF394Q53GI3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF394Q53GI3 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
ZNF394Q53GI3 RNA5SP220-201ENST00000516298 104 ntBASIC1.06□□□□□ -2.24
ZNF394Q53GI3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.05□□□□□ -2.24
ZNF394Q53GI3 SNORD28-201ENST00000384706 75 ntBASIC1.05□□□□□ -2.24
ZNF394Q53GI3 RNU6-519P-201ENST00000410590 108 ntBASIC1.05□□□□□ -2.24
ZNF394Q53GI3 ACA64.5-201ENST00000516207 127 ntBASIC1.05□□□□□ -2.24
ZNF394Q53GI3 RNA5SP403-201ENST00000363598 108 ntBASIC1.04□□□□□ -2.24
ZNF394Q53GI3 Y_RNA.283-201ENST00000364798 112 ntBASIC1.04□□□□□ -2.24
ZNF394Q53GI3 RNU6-42P-201ENST00000384165 107 ntBASIC1.04□□□□□ -2.24
ZNF394Q53GI3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.04□□□□□ -2.24
ZNF394Q53GI3 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
ZNF394Q53GI3 TRDV1-202ENST00000621643 102 ntBASIC1.04□□□□□ -2.24
ZNF394Q53GI3 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
ZNF394Q53GI3 SNORD115-44-201ENST00000365391 82 ntBASIC1.03□□□□□ -2.24
ZNF394Q53GI3 Y_RNA.369-201ENST00000365568 117 ntBASIC1.03□□□□□ -2.24
ZNF394Q53GI3 AL161932.1-201ENST00000437408 146 ntBASIC1.03□□□□□ -2.24
ZNF394Q53GI3 RNU6-65P-201ENST00000516332 98 ntBASIC1.03□□□□□ -2.24
ZNF394Q53GI3 RNA5SP47-201ENST00000517230 109 ntBASIC1.03□□□□□ -2.24
ZNF394Q53GI3 RNU6-1298P-201ENST00000362456 101 ntBASIC1.02□□□□□ -2.25
ZNF394Q53GI3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.02□□□□□ -2.25
ZNF394Q53GI3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.02□□□□□ -2.25
ZNF394Q53GI3 snoU13.11-201ENST00000459219 104 ntBASIC1.02□□□□□ -2.25
ZNF394Q53GI3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.02□□□□□ -2.25
ZNF394Q53GI3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF394Q53GI3 RNU6-1131P-201ENST00000364955 107 ntBASIC1.01□□□□□ -2.25
ZNF394Q53GI3 RNU6-844P-201ENST00000517175 102 ntBASIC1.01□□□□□ -2.25
ZNF394Q53GI3 MIR4536-1-201ENST00000583537 88 ntBASIC1.01□□□□□ -2.25
ZNF394Q53GI3 AC244669.1-204ENST00000621564 178 ntBASIC1.01□□□□□ -2.25
ZNF394Q53GI3 Y_RNA.190-201ENST00000363964 101 ntBASIC1□□□□□ -2.25
ZNF394Q53GI3 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
ZNF394Q53GI3 MIR140-201ENST00000385282 100 ntBASIC1□□□□□ -2.25
ZNF394Q53GI3 PSMC1P5-201ENST00000512850 177 ntBASIC1□□□□□ -2.25
ZNF394Q53GI3 RNU7-161P-201ENST00000517289 62 ntBASIC1□□□□□ -2.25
ZNF394Q53GI3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1□□□□□ -2.25
ZNF394Q53GI3 AC067863.3-201ENST00000624172 122 ntBASIC1□□□□□ -2.25
ZNF394Q53GI3 RNU6-957P-201ENST00000363652 99 ntBASIC0.99□□□□□ -2.25
ZNF394Q53GI3 SNORD116-22-201ENST00000384430 92 ntBASIC0.99□□□□□ -2.25
ZNF394Q53GI3 SNORD4B-201ENST00000459083 72 ntBASIC0.99□□□□□ -2.25
ZNF394Q53GI3 RNU7-13P-201ENST00000516413 62 ntBASIC0.99□□□□□ -2.25
ZNF394Q53GI3 MIR5582-201ENST00000579697 68 ntBASIC0.99□□□□□ -2.25
ZNF394Q53GI3 MIR7111-201ENST00000619751 72 ntBASIC0.99□□□□□ -2.25
ZNF394Q53GI3 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
ZNF394Q53GI3 Y_RNA.43-201ENST00000362670 111 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 Y_RNA.609-201ENST00000410669 89 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 RNU7-85P-201ENST00000458851 63 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 RNA5SP94-201ENST00000516917 108 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 MIR4653-201ENST00000585107 83 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 MIR6828-201ENST00000636181 60 ntBASIC0.98□□□□□ -2.25
ZNF394Q53GI3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
ZNF394Q53GI3 RNU6-49P-201ENST00000384256 107 ntBASIC0.97□□□□□ -2.25
ZNF394Q53GI3 RNU7-104P-201ENST00000459398 79 ntBASIC0.97□□□□□ -2.25
ZNF394Q53GI3 AC026421.1-201ENST00000519101 163 ntBASIC0.97□□□□□ -2.25
ZNF394Q53GI3 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
ZNF394Q53GI3 MTRNR2L2-201ENST00000604882 87 ntBASIC0.97□□□□□ -2.25
ZNF394Q53GI3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
ZNF394Q53GI3 RNU7-74P-201ENST00000459104 62 ntBASIC0.96□□□□□ -2.26
ZNF394Q53GI3 RNY1P7-201ENST00000384743 110 ntBASIC0.95□□□□□ -2.26
ZNF394Q53GI3 MIR548U-201ENST00000390728 81 ntBASIC0.95□□□□□ -2.26
ZNF394Q53GI3 RNU6-75P-201ENST00000515944 104 ntBASIC0.95□□□□□ -2.26
ZNF394Q53GI3 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
ZNF394Q53GI3 AL606490.4-201ENST00000423117 127 ntBASIC0.94□□□□□ -2.26
ZNF394Q53GI3 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
ZNF394Q53GI3 RNU1-93P-201ENST00000364704 169 ntBASIC0.93□□□□□ -2.26
ZNF394Q53GI3 SNORD101-201ENST00000384027 73 ntBASIC0.93□□□□□ -2.26
ZNF394Q53GI3 Y_RNA.558-201ENST00000384685 113 ntBASIC0.93□□□□□ -2.26
ZNF394Q53GI3 SNORD41.1-201ENST00000391000 69 ntBASIC0.93□□□□□ -2.26
ZNF394Q53GI3 MIR548L-201ENST00000408303 86 ntBASIC0.93□□□□□ -2.26
ZNF394Q53GI3 MIR4668-201ENST00000582284 70 ntBASIC0.93□□□□□ -2.26
ZNF394Q53GI3 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 RNU6-294P-201ENST00000364999 102 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 RNU6-1134P-201ENST00000365156 101 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 RNA5SP227-201ENST00000516184 113 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 RNA5SP268-201ENST00000516828 124 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 MIR151B-201ENST00000584249 96 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 AC092634.7-201ENST00000621022 103 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 U6.100-201ENST00000636230 99 ntBASIC0.92□□□□□ -2.26
ZNF394Q53GI3 RNU6-664P-201ENST00000362381 107 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 RNU6-1255P-201ENST00000363434 112 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 RNU6-726P-201ENST00000364680 107 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 RNU6-811P-201ENST00000384069 107 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 MIR520E-201ENST00000384867 87 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 MIR3920-201ENST00000581751 86 ntBASIC0.91□□□□□ -2.26
ZNF394Q53GI3 MIR489-201ENST00000384923 84 ntBASIC0.9□□□□□ -2.27
ZNF394Q53GI3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
ZNF394Q53GI3 AC006254.2-201ENST00000603259 279 ntBASIC0.9□□□□□ -2.27
ZNF394Q53GI3 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms