Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SNORD115-19-201ENST00000363098 82 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 SNORD115-18-201ENST00000363293 82 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 SNORD115-17-201ENST00000364612 82 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 RNA5SP205-201ENST00000364653 136 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 MT-TI-201ENST00000387365 69 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 MIR3121-201ENST00000579680 77 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 MIR4473-201ENST00000583731 91 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 U4.1-201ENST00000620349 87 ntBASIC-0.54□□□□□ -2.5
MSH6P52701 SNORD14C-201ENST00000365382 88 ntBASIC-0.55□□□□□ -2.5
MSH6P52701 SNORD38.2-201ENST00000384470 69 ntBASIC-0.55□□□□□ -2.5
MSH6P52701 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 MIR601-201ENST00000385256 79 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 MIR2113-201ENST00000459007 91 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 RNU6-287P-201ENST00000516230 98 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 MIR4460-201ENST00000577862 86 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 MIR3681-201ENST00000580089 72 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 AC072026.1-201ENST00000605023 201 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 AC021753.1-201ENST00000635724 168 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 MIR4788-201ENST00000639104 80 ntBASIC-0.56□□□□□ -2.5
MSH6P52701 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 MIR196A2-201ENST00000385189 110 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 AC130289.1-201ENST00000577321 73 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 SNORD36A-201ENST00000362874 73 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 SNORD114-29-201ENST00000364819 70 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 RNU6-327P-201ENST00000516270 127 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 RNU6-175P-201ENST00000516896 107 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 MIR3163-201ENST00000581592 73 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 AL590491.3-201ENST00000610731 82 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
MSH6P52701 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.58□□□□□ -2.5
MSH6P52701 MT-TY-201ENST00000387409 66 ntBASIC-0.58□□□□□ -2.5
MSH6P52701 AL118496.2-201ENST00000448300 230 ntBASIC-0.58□□□□□ -2.5
MSH6P52701 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.58□□□□□ -2.5
MSH6P52701 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.58□□□□□ -2.5
MSH6P52701 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.58□□□□□ -2.5
MSH6P52701 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.58□□□□□ -2.5
MSH6P52701 MIR548AE1-201ENST00000583292 70 ntBASIC-0.58□□□□□ -2.5
MSH6P52701 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.59□□□□□ -2.5
MSH6P52701 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.59□□□□□ -2.5
MSH6P52701 RNU6-243P-201ENST00000391140 107 ntBASIC-0.59□□□□□ -2.5
MSH6P52701 MIR4503-201ENST00000582187 83 ntBASIC-0.59□□□□□ -2.5
MSH6P52701 AC141273.2-201ENST00000618989 130 ntBASIC-0.59□□□□□ -2.5
MSH6P52701 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.59□□□□□ -2.5
MSH6P52701 RNU4-32P-201ENST00000363404 141 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 SNORA51.5-201ENST00000384126 131 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 RNU7-197P-201ENST00000458836 62 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 MIR1255B1-201ENST00000636325 63 ntBASIC-0.6□□□□□ -2.51
MSH6P52701 MIR539-201ENST00000365690 78 ntBASIC-0.61□□□□□ -2.51
MSH6P52701 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.61□□□□□ -2.51
MSH6P52701 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.61□□□□□ -2.51
MSH6P52701 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.61□□□□□ -2.51
MSH6P52701 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.61□□□□□ -2.51
MSH6P52701 TRDV1-202ENST00000621643 102 ntBASIC-0.61□□□□□ -2.51
MSH6P52701 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.62□□□□□ -2.51
MSH6P52701 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.62□□□□□ -2.51
MSH6P52701 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.62□□□□□ -2.51
MSH6P52701 RNU6-154P-201ENST00000384306 106 ntBASIC-0.62□□□□□ -2.51
MSH6P52701 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.63□□□□□ -2.51
MSH6P52701 MIR759-201ENST00000390224 91 ntBASIC-0.63□□□□□ -2.51
MSH6P52701 AL161932.1-201ENST00000437408 146 ntBASIC-0.63□□□□□ -2.51
MSH6P52701 SPINT5P-201ENST00000448174 155 ntBASIC-0.63□□□□□ -2.51
MSH6P52701 RN7SKP19-201ENST00000516016 252 ntBASIC-0.63□□□□□ -2.51
MSH6P52701 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.63□□□□□ -2.51
MSH6P52701 RNU6-90P-201ENST00000606352 106 ntBASIC-0.63□□□□□ -2.51
MSH6P52701 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.64□□□□□ -2.51
MSH6P52701 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.64□□□□□ -2.51
MSH6P52701 RNU4-11P-201ENST00000365287 132 ntBASIC-0.64□□□□□ -2.51
MSH6P52701 RNU6-735P-201ENST00000410612 107 ntBASIC-0.64□□□□□ -2.51
MSH6P52701 SNORA7.5-201ENST00000410672 110 ntBASIC-0.64□□□□□ -2.51
MSH6P52701 AC007012.1-201ENST00000567192 175 ntBASIC-0.64□□□□□ -2.51
MSH6P52701 U6.100-201ENST00000636230 99 ntBASIC-0.64□□□□□ -2.51
MSH6P52701 MIR20A-201ENST00000362279 71 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 RNA5SP136-201ENST00000410906 107 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 RNU6-284P-201ENST00000411105 106 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 AP002392.1-201ENST00000537692 208 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 MIR198-201ENST00000637333 62 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 AL512310.12-203ENST00000640543 90 ntBASIC-0.65□□□□□ -2.51
MSH6P52701 RNU6-363P-201ENST00000362895 105 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 SNORD114-11-201ENST00000363738 75 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 SNORD38.1-201ENST00000363863 68 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms