Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD38.2-201ENST00000384470 69 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 MIR181B2-201ENST00000385004 89 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 AL161932.1-201ENST00000437408 146 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 MIR2113-201ENST00000459007 91 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 MIR3666-201ENST00000607845 111 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 MIR6507-201ENST00000613630 70 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 uc_338.10-201ENST00000621872 182 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 RNU6-151P-201ENST00000364158 107 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 SNORA51.5-201ENST00000384126 131 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 AC244250.2-201ENST00000418731 148 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 RNU6-287P-201ENST00000516230 98 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 MIR4460-201ENST00000577862 86 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 MIR548AE1-201ENST00000583292 70 ntBASIC-0.39□□□□□ -2.47
CXCL12P48061 MIR655-201ENST00000362159 97 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 RNU6-682P-201ENST00000363843 106 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 RNA5SP300-201ENST00000391197 107 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 RNU6-735P-201ENST00000410612 107 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 SNORA7.5-201ENST00000410672 110 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 TRDV1-202ENST00000621643 102 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 AL162726.3-218ENST00000636401 95 ntBASIC-0.4□□□□□ -2.47
CXCL12P48061 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 RNU6-811P-201ENST00000384069 107 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 RNU6-463P-201ENST00000384340 107 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 RNU6-243P-201ENST00000391140 107 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 MIR1263-201ENST00000408324 86 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 RPS29P8-201ENST00000445109 171 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 SPINT5P-201ENST00000448174 155 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 RNU7-120P-201ENST00000459334 63 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 AC074198.2-201ENST00000508153 258 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 RN7SKP19-201ENST00000516016 252 ntBASIC-0.41□□□□□ -2.48
CXCL12P48061 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 SNORD36A-201ENST00000362874 73 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 RNA5SP205-201ENST00000364653 136 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 RNU6-320P-201ENST00000516511 106 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 U6.100-201ENST00000636230 99 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 AL512310.12-203ENST00000640543 90 ntBASIC-0.42□□□□□ -2.48
CXCL12P48061 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.43□□□□□ -2.48
CXCL12P48061 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.43□□□□□ -2.48
CXCL12P48061 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.43□□□□□ -2.48
CXCL12P48061 MIR759-201ENST00000390224 91 ntBASIC-0.43□□□□□ -2.48
CXCL12P48061 RNU6-138P-201ENST00000515952 107 ntBASIC-0.43□□□□□ -2.48
CXCL12P48061 SNORA81.3-201ENST00000517283 198 ntBASIC-0.43□□□□□ -2.48
CXCL12P48061 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
CXCL12P48061 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU6-957P-201ENST00000363652 99 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU6-379P-201ENST00000363813 104 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU6-200P-201ENST00000364743 107 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU6-154P-201ENST00000384306 106 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 MT-TY-201ENST00000387409 66 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU6-175P-201ENST00000516896 107 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 MIR4263-201ENST00000584745 83 ntBASIC-0.44□□□□□ -2.48
CXCL12P48061 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 RNU6-647P-201ENST00000364243 107 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 SNORD114-29-201ENST00000364819 70 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 MIR539-201ENST00000365690 78 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 MIR224-201ENST00000384889 81 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 MIR548D2-201ENST00000384955 97 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 MIR513C-201ENST00000401352 84 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 MIR548G-201ENST00000408442 89 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 AL353813.1-201ENST00000440700 253 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 AP001328.1-201ENST00000528550 176 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 RNU6-90P-201ENST00000606352 106 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.45□□□□□ -2.48
CXCL12P48061 RNU6-363P-201ENST00000362895 105 ntBASIC-0.46□□□□□ -2.48
CXCL12P48061 SNORD38.1-201ENST00000363863 68 ntBASIC-0.46□□□□□ -2.48
CXCL12P48061 SNORD116-18-201ENST00000383961 92 ntBASIC-0.46□□□□□ -2.48
CXCL12P48061 RNA5SP136-201ENST00000410906 107 ntBASIC-0.46□□□□□ -2.48
CXCL12P48061 RNU6-388P-201ENST00000517012 105 ntBASIC-0.46□□□□□ -2.48
CXCL12P48061 RNU6-389P-201ENST00000517048 105 ntBASIC-0.46□□□□□ -2.48
CXCL12P48061 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.46□□□□□ -2.48
CXCL12P48061 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 RNU6-781P-201ENST00000516377 101 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 AL590491.3-201ENST00000610731 82 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 AP001340.1-201ENST00000624405 217 ntBASIC-0.47□□□□□ -2.48
CXCL12P48061 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.48□□□□□ -2.49
CXCL12P48061 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms