Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR1255B1-201ENST00000636325 63 ntBASIC-1.06□□□□□ -2.58
UPK1BO75841 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.07□□□□□ -2.58
UPK1BO75841 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
UPK1BO75841 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.07□□□□□ -2.58
UPK1BO75841 RNU6-918P-201ENST00000391219 106 ntBASIC-1.07□□□□□ -2.58
UPK1BO75841 MIR1265-201ENST00000408444 86 ntBASIC-1.07□□□□□ -2.58
UPK1BO75841 RNA5SP25-201ENST00000410815 110 ntBASIC-1.07□□□□□ -2.58
UPK1BO75841 AL500527.2-201ENST00000454105 95 ntBASIC-1.07□□□□□ -2.58
UPK1BO75841 AC021753.1-201ENST00000635724 168 ntBASIC-1.07□□□□□ -2.58
UPK1BO75841 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 SNORD115-19-201ENST00000363098 82 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 SNORD115-18-201ENST00000363293 82 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 SNORD114-25-201ENST00000363742 72 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 SNORD115-17-201ENST00000364612 82 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 MTATP6P23-201ENST00000440153 476 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 RNU6-762P-201ENST00000517107 102 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 MIR3646-201ENST00000578301 84 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 MIR3658-201ENST00000636291 56 ntBASIC-1.08□□□□□ -2.58
UPK1BO75841 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.09□□□□□ -2.58
UPK1BO75841 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.09□□□□□ -2.58
UPK1BO75841 SNORD101-201ENST00000384027 73 ntBASIC-1.09□□□□□ -2.58
UPK1BO75841 SNORD37.2-201ENST00000391075 66 ntBASIC-1.09□□□□□ -2.58
UPK1BO75841 SNORA7.5-201ENST00000410672 110 ntBASIC-1.09□□□□□ -2.58
UPK1BO75841 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.09□□□□□ -2.58
UPK1BO75841 MIR548O2-201ENST00000616090 70 ntBASIC-1.09□□□□□ -2.58
UPK1BO75841 RNU6-35P-201ENST00000384530 107 ntBASIC-1.1□□□□□ -2.59
UPK1BO75841 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.1□□□□□ -2.59
UPK1BO75841 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.1□□□□□ -2.59
UPK1BO75841 MTCYBP6-201ENST00000441810 138 ntBASIC-1.1□□□□□ -2.59
UPK1BO75841 SNORA40.17-201ENST00000517256 115 ntBASIC-1.1□□□□□ -2.59
UPK1BO75841 MIR4696-201ENST00000581431 70 ntBASIC-1.1□□□□□ -2.59
UPK1BO75841 AL512310.12-203ENST00000640543 90 ntBASIC-1.1□□□□□ -2.59
UPK1BO75841 RNU4-36P-201ENST00000364294 144 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 MIR548G-201ENST00000408442 89 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 AC097510.1-201ENST00000510945 133 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 MIR3163-201ENST00000581592 73 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 MIR4499-201ENST00000584834 69 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 RNU6-90P-201ENST00000606352 106 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 uc_338.19-201ENST00000616808 99 ntBASIC-1.11□□□□□ -2.59
UPK1BO75841 MTND5P18-201ENST00000445624 1801 ntBASIC-1.12□□□□□ -2.59
UPK1BO75841 RNU6-664P-201ENST00000362381 107 ntBASIC-1.12□□□□□ -2.59
UPK1BO75841 RNU6-312P-201ENST00000364629 107 ntBASIC-1.12□□□□□ -2.59
UPK1BO75841 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.12□□□□□ -2.59
UPK1BO75841 MIR582-201ENST00000365731 98 ntBASIC-1.12□□□□□ -2.59
UPK1BO75841 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.12□□□□□ -2.59
UPK1BO75841 MIR5704-201ENST00000584029 77 ntBASIC-1.12□□□□□ -2.59
UPK1BO75841 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.13□□□□□ -2.59
UPK1BO75841 RNU6-54P-201ENST00000365563 107 ntBASIC-1.13□□□□□ -2.59
UPK1BO75841 RNU6-466P-201ENST00000391224 103 ntBASIC-1.13□□□□□ -2.59
UPK1BO75841 RNU6-721P-201ENST00000410155 105 ntBASIC-1.13□□□□□ -2.59
UPK1BO75841 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.13□□□□□ -2.59
UPK1BO75841 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.13□□□□□ -2.59
UPK1BO75841 MIR4324-201ENST00000584846 72 ntBASIC-1.13□□□□□ -2.59
UPK1BO75841 RNU6-973P-201ENST00000364690 107 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR216B-201ENST00000390186 82 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 SNORD58.1-201ENST00000391313 66 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR548F4-201ENST00000408515 105 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 SNORA13-201ENST00000458790 133 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 RNU6-274P-201ENST00000459566 107 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 RNA5SP470-201ENST00000516463 106 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 AP002392.1-201ENST00000537692 208 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR378F-201ENST00000578143 78 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR3179-1-201ENST00000578940 84 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR3179-2-201ENST00000579107 84 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR3179-3-201ENST00000579566 84 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR3179-4-201ENST00000617599 84 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 MIR6738-201ENST00000619620 64 ntBASIC-1.14□□□□□ -2.59
UPK1BO75841 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.15□□□□□ -2.59
UPK1BO75841 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.15□□□□□ -2.59
UPK1BO75841 MIR518B-201ENST00000385127 83 ntBASIC-1.15□□□□□ -2.59
UPK1BO75841 MIR548E-201ENST00000408287 88 ntBASIC-1.15□□□□□ -2.59
UPK1BO75841 snoU13.11-201ENST00000459219 104 ntBASIC-1.15□□□□□ -2.59
UPK1BO75841 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.15□□□□□ -2.59
UPK1BO75841 AC044792.1-201ENST00000593294 196 ntBASIC-1.15□□□□□ -2.59
UPK1BO75841 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.16□□□□□ -2.6
UPK1BO75841 SNORD38.1-201ENST00000363863 68 ntBASIC-1.16□□□□□ -2.6
UPK1BO75841 RNU6-476P-201ENST00000384726 107 ntBASIC-1.16□□□□□ -2.6
UPK1BO75841 RNU6-935P-201ENST00000410371 100 ntBASIC-1.16□□□□□ -2.6
UPK1BO75841 SNORD2-201ENST00000459163 69 ntBASIC-1.16□□□□□ -2.6
UPK1BO75841 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.16□□□□□ -2.6
UPK1BO75841 SNORD22.1-201ENST00000516331 125 ntBASIC-1.16□□□□□ -2.6
UPK1BO75841 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.17□□□□□ -2.6
UPK1BO75841 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.17□□□□□ -2.6
UPK1BO75841 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.17□□□□□ -2.6
UPK1BO75841 SNORD114-15-201ENST00000364687 72 ntBASIC-1.17□□□□□ -2.6
UPK1BO75841 RNU6-239P-201ENST00000390990 99 ntBASIC-1.17□□□□□ -2.6
UPK1BO75841 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.17□□□□□ -2.6
UPK1BO75841 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.17□□□□□ -2.6
UPK1BO75841 MIR548AX-201ENST00000580117 73 ntBASIC-1.17□□□□□ -2.6
UPK1BO75841 RNU6-502P-201ENST00000362419 108 ntBASIC-1.18□□□□□ -2.6
UPK1BO75841 RNU6-235P-201ENST00000362644 107 ntBASIC-1.18□□□□□ -2.6
UPK1BO75841 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.18□□□□□ -2.6
UPK1BO75841 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms