Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 U4.2-201ENST00000618561 85 ntBASIC-2.17□□□□□ -2.76
HMGB3O15347 AL365265.1-201ENST00000621045 234 ntBASIC-2.17□□□□□ -2.76
HMGB3O15347 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNU4-17P-201ENST00000365598 141 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 MIR451A-201ENST00000385059 72 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNU6-466P-201ENST00000391224 103 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.18□□□□□ -2.76
HMGB3O15347 MTND3P22-201ENST00000510932 243 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNA5SP272-201ENST00000516095 111 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 MIR4744-201ENST00000581563 82 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 AL627230.5-201ENST00000619807 58 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RNU4-61P-201ENST00000411243 107 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RNU6-976P-201ENST00000516086 111 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RNU6-521P-201ENST00000516663 105 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
HMGB3O15347 AP002392.1-201ENST00000537692 208 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.2□□□□□ -2.76
HMGB3O15347 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.2□□□□□ -2.76
HMGB3O15347 MIR3908-201ENST00000579798 126 ntBASIC-2.2□□□□□ -2.76
HMGB3O15347 SNORD18.1-201ENST00000363807 70 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 RNU6-718P-201ENST00000516166 105 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 RNU6-647P-201ENST00000364243 107 ntBASIC-2.22□□□□□ -2.76
HMGB3O15347 RNU4-24P-201ENST00000364565 139 ntBASIC-2.22□□□□□ -2.76
HMGB3O15347 RNU6-643P-201ENST00000384018 107 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-746P-201ENST00000384112 109 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-578P-201ENST00000390980 103 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 MIR548F1-201ENST00000408667 84 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-651P-201ENST00000411040 105 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 MTATP6P21-201ENST00000440681 189 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-732P-201ENST00000516033 103 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 RNU6-720P-201ENST00000516363 108 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 MIR4308-201ENST00000580634 81 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 MIR6888-201ENST00000621977 67 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 RNA5SP86-201ENST00000390869 98 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 MIR548H1-201ENST00000408610 102 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 MIR1252-201ENST00000408861 65 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 RNU6-90P-201ENST00000606352 106 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-19-201ENST00000363098 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-18-201ENST00000363293 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-33-201ENST00000363723 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-17-201ENST00000364612 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD63.1-201ENST00000516178 80 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 MIR4282-201ENST00000583613 67 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNY4P27-201ENST00000363341 96 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-770P-201ENST00000363929 105 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 MIR548G-201ENST00000408442 89 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU2-51P-201ENST00000410708 197 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 FGF7P4-201ENST00000509595 295 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-277P-201ENST00000516272 106 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-412P-201ENST00000516434 106 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 SNORA26.4-201ENST00000391188 123 ntBASIC-2.28□□□□□ -2.77
HMGB3O15347 SNORA40.15-201ENST00000516884 107 ntBASIC-2.28□□□□□ -2.77
HMGB3O15347 U6.96-201ENST00000636425 70 ntBASIC-2.28□□□□□ -2.77
HMGB3O15347 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 RNU6-823P-201ENST00000391042 103 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 RNY4P20-201ENST00000516678 93 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 RNU6-924P-201ENST00000362926 108 ntBASIC-2.3□□□□□ -2.78
HMGB3O15347 ELOCP20-201ENST00000422460 345 ntBASIC-2.3□□□□□ -2.78
HMGB3O15347 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.3□□□□□ -2.78
HMGB3O15347 AC091912.2-201ENST00000624798 167 ntBASIC-2.3□□□□□ -2.78
HMGB3O15347 RNU6-495P-201ENST00000362995 107 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 SNORA2.1-201ENST00000363089 137 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.31□□□□□ -2.78
HMGB3O15347 RNY3P15-201ENST00000516297 97 ntBASIC-2.31□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms