Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 IGKV1-22-201ENST00000524313 326 ntBASIC-1.26□□□□□ -2.61
LSM1O15116 RNU6-235P-201ENST00000362644 107 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 MIR216B-201ENST00000390186 82 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 SCARNA17-201ENST00000516183 144 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 RNU7-6P-201ENST00000516845 62 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 RNU6-86P-201ENST00000606534 107 ntBASIC-1.27□□□□□ -2.61
LSM1O15116 RNU6-238P-201ENST00000363313 106 ntBASIC-1.28□□□□□ -2.61
LSM1O15116 SNORD18B-201ENST00000365659 72 ntBASIC-1.28□□□□□ -2.61
LSM1O15116 MIR548F4-201ENST00000408515 105 ntBASIC-1.28□□□□□ -2.61
LSM1O15116 RNU2-38P-201ENST00000410856 79 ntBASIC-1.28□□□□□ -2.61
LSM1O15116 MTATP8P1-201ENST00000467115 207 ntBASIC-1.28□□□□□ -2.61
LSM1O15116 RNU6-881P-201ENST00000516813 102 ntBASIC-1.28□□□□□ -2.61
LSM1O15116 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.29□□□□□ -2.62
LSM1O15116 RNU6-312P-201ENST00000364629 107 ntBASIC-1.29□□□□□ -2.62
LSM1O15116 SNORD127-201ENST00000458892 86 ntBASIC-1.29□□□□□ -2.62
LSM1O15116 SNORD2-201ENST00000459163 69 ntBASIC-1.29□□□□□ -2.62
LSM1O15116 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.29□□□□□ -2.62
LSM1O15116 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.29□□□□□ -2.62
LSM1O15116 MIR6086-201ENST00000638065 55 ntBASIC-1.29□□□□□ -2.62
LSM1O15116 RNU6-502P-201ENST00000362419 108 ntBASIC-1.3□□□□□ -2.62
LSM1O15116 RNU6-973P-201ENST00000364690 107 ntBASIC-1.3□□□□□ -2.62
LSM1O15116 MIR4696-201ENST00000581431 70 ntBASIC-1.3□□□□□ -2.62
LSM1O15116 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.31□□□□□ -2.62
LSM1O15116 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.31□□□□□ -2.62
LSM1O15116 SNORD83B-201ENST00000386745 93 ntBASIC-1.31□□□□□ -2.62
LSM1O15116 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.31□□□□□ -2.62
LSM1O15116 MTATP6P23-201ENST00000440153 476 ntBASIC-1.31□□□□□ -2.62
LSM1O15116 MIR1255B1-201ENST00000636325 63 ntBASIC-1.31□□□□□ -2.62
LSM1O15116 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.32□□□□□ -2.62
LSM1O15116 RNU4-36P-201ENST00000364294 144 ntBASIC-1.32□□□□□ -2.62
LSM1O15116 SNORD101-201ENST00000384027 73 ntBASIC-1.32□□□□□ -2.62
LSM1O15116 RNU7-121P-201ENST00000516604 62 ntBASIC-1.32□□□□□ -2.62
LSM1O15116 MIR3163-201ENST00000581592 73 ntBASIC-1.32□□□□□ -2.62
LSM1O15116 RNU6-664P-201ENST00000362381 107 ntBASIC-1.33□□□□□ -2.62
LSM1O15116 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.33□□□□□ -2.62
LSM1O15116 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.33□□□□□ -2.62
LSM1O15116 MIR582-201ENST00000365731 98 ntBASIC-1.33□□□□□ -2.62
LSM1O15116 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.33□□□□□ -2.62
LSM1O15116 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.33□□□□□ -2.62
LSM1O15116 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.34□□□□□ -2.62
LSM1O15116 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.34□□□□□ -2.62
LSM1O15116 MIR548E-201ENST00000408287 88 ntBASIC-1.34□□□□□ -2.62
LSM1O15116 MIR548G-201ENST00000408442 89 ntBASIC-1.34□□□□□ -2.62
LSM1O15116 RNU6-721P-201ENST00000410155 105 ntBASIC-1.34□□□□□ -2.62
LSM1O15116 MIR548AX-201ENST00000580117 73 ntBASIC-1.34□□□□□ -2.62
LSM1O15116 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.35□□□□□ -2.63
LSM1O15116 RNY4P3-201ENST00000365254 95 ntBASIC-1.35□□□□□ -2.63
LSM1O15116 RNU6-476P-201ENST00000384726 107 ntBASIC-1.35□□□□□ -2.63
LSM1O15116 RNU6-90P-201ENST00000606352 106 ntBASIC-1.35□□□□□ -2.63
LSM1O15116 MTND5P18-201ENST00000445624 1801 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 SNORD38.1-201ENST00000363863 68 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 MIR518B-201ENST00000385127 83 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 RNU6-935P-201ENST00000410371 100 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 SPINT5P-201ENST00000448174 155 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 snoU13.19-201ENST00000459148 104 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 MIR3658-201ENST00000636291 56 ntBASIC-1.36□□□□□ -2.63
LSM1O15116 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 RNU6-239P-201ENST00000390990 99 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 AL353813.1-201ENST00000440700 253 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 MIR3179-1-201ENST00000578940 84 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 MIR3179-2-201ENST00000579107 84 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 MIR3179-3-201ENST00000579566 84 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 MIR3179-4-201ENST00000617599 84 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 AC021753.1-201ENST00000635724 168 ntBASIC-1.37□□□□□ -2.63
LSM1O15116 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.38□□□□□ -2.63
LSM1O15116 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.38□□□□□ -2.63
LSM1O15116 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.38□□□□□ -2.63
LSM1O15116 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.38□□□□□ -2.63
LSM1O15116 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 RNU6-54P-201ENST00000365563 107 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 RNU6-466P-201ENST00000391224 103 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 AC097510.1-201ENST00000510945 133 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 RNU4-71P-201ENST00000516258 113 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 AP002392.1-201ENST00000537692 208 ntBASIC-1.39□□□□□ -2.63
LSM1O15116 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.4□□□□□ -2.63
LSM1O15116 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.4□□□□□ -2.63
LSM1O15116 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.4□□□□□ -2.63
LSM1O15116 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.4□□□□□ -2.63
LSM1O15116 MIR3121-201ENST00000579680 77 ntBASIC-1.4□□□□□ -2.63
LSM1O15116 MIR5704-201ENST00000584029 77 ntBASIC-1.4□□□□□ -2.63
LSM1O15116 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.4□□□□□ -2.63
LSM1O15116 RNU6-363P-201ENST00000362895 105 ntBASIC-1.41□□□□□ -2.64
LSM1O15116 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.41□□□□□ -2.64
LSM1O15116 SNORA7.5-201ENST00000410672 110 ntBASIC-1.41□□□□□ -2.64
LSM1O15116 SNORD22.1-201ENST00000516331 125 ntBASIC-1.41□□□□□ -2.64
LSM1O15116 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.41□□□□□ -2.64
LSM1O15116 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.42□□□□□ -2.64
LSM1O15116 U3.27-201ENST00000391237 200 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms