Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.16□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.16□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.16□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.16□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-400P-201ENST00000391173 106 ntBASIC-2.16□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.16□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-699P-201ENST00000517081 110 ntBASIC-2.16□□□□□ -2.76
TRAV1-2A0A0B4J238 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-326P-201ENST00000365480 107 ntBASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORA40.14-201ENST00000516543 86 ntBASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 AC006362.1-201ENST00000567392 174 ntBASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 MIR4490-201ENST00000582647 84 ntBASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 AC103591.3-201ENST00000608684 209 ntBASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 MIR664B-201ENST00000626756 61 ntBASIC-2.17□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORA25.1-201ENST00000362326 128 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORD115-46-201ENST00000390982 71 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU7-24P-201ENST00000458867 62 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 FGF7P7-201ENST00000514120 227 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-90P-201ENST00000606352 106 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 MIR5683-201ENST00000636514 76 ntBASIC-2.18□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORD19-201ENST00000391191 68 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 MIR548G-201ENST00000408442 89 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 MTND3P22-201ENST00000510932 243 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-980P-201ENST00000516925 103 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 CYP3A54P-201ENST00000566950 75 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 MIR5690-201ENST00000583739 73 ntBASIC-2.19□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-79P-201ENST00000362511 107 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU4-24P-201ENST00000364565 139 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-381P-201ENST00000391259 108 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 Z99129.1-201ENST00000612510 255 ntBASIC-2.2□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.21□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.21□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-290P-201ENST00000365212 101 ntBASIC-2.21□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.21□□□□□ -2.76
TRAV1-2A0A0B4J238 MIR548A1-201ENST00000385041 97 ntBASIC-2.21□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.21□□□□□ -2.76
TRAV1-2A0A0B4J238 MIR376A1-201ENST00000616574 68 ntBASIC-2.21□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.22□□□□□ -2.76
TRAV1-2A0A0B4J238 RNU6-774P-201ENST00000363238 107 ntBASIC-2.22□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORA33.1-201ENST00000364957 130 ntBASIC-2.22□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORD81.2-201ENST00000365153 76 ntBASIC-2.22□□□□□ -2.76
TRAV1-2A0A0B4J238 AC018880.2-201ENST00000414265 201 ntBASIC-2.22□□□□□ -2.76
TRAV1-2A0A0B4J238 SNORA20.3-201ENST00000516880 132 ntBASIC-2.22□□□□□ -2.76
TRAV1-2A0A0B4J238 AC092794.1-201ENST00000612734 582 ntBASIC-2.22□□□□□ -2.76
TRAV1-2A0A0B4J238 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 RPL35AP4-201ENST00000412007 102 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 FGF7P4-201ENST00000509595 295 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 RNU7-154P-201ENST00000516194 62 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 MIR3139-201ENST00000579145 76 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 AL138825.1-201ENST00000618587 192 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 AC104985.2-201ENST00000620598 500 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 AC090582.1-201ENST00000636321 199 ntBASIC-2.23□□□□□ -2.77
TRAV1-2A0A0B4J238 SNORA63.2-201ENST00000362603 126 ntBASIC-2.24□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.24□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.24□□□□□ -2.77
TRAV1-2A0A0B4J238 RNY4P14-201ENST00000363656 96 ntBASIC-2.24□□□□□ -2.77
TRAV1-2A0A0B4J238 SNORD38.1-201ENST00000363863 68 ntBASIC-2.24□□□□□ -2.77
TRAV1-2A0A0B4J238 snoU13.17-201ENST00000458802 104 ntBASIC-2.24□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 RNU6-260P-201ENST00000384092 107 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 SNORA24B-201ENST00000384176 131 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 AL121914.1-201ENST00000450188 156 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 SNORD116.3-201ENST00000517176 78 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 SNORD58B-201ENST00000607313 66 ntBASIC-2.25□□□□□ -2.77
TRAV1-2A0A0B4J238 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 MIR3140-201ENST00000583685 90 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 AC037487.3-201ENST00000606668 112 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 AL606534.2-204ENST00000635008 178 ntBASIC-2.26□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 MIR519A2-201ENST00000384990 87 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 RNU7-6P-201ENST00000516845 62 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 AC025253.1-201ENST00000613623 543 ntBASIC-2.27□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms