Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNU6-168P-201ENST00000516189 101 ntBASIC-2.28□□□□□ -2.77
HLA-DRB4X5D2U9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.28□□□□□ -2.77
HLA-DRB4X5D2U9 AC022079.1-201ENST00000621546 602 ntBASIC-2.28□□□□□ -2.77
HLA-DRB4X5D2U9 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.357-201ENST00000365487 109 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD101-201ENST00000384027 73 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 MIR624-201ENST00000385217 97 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD54-201ENST00000459159 67 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 AC006362.1-201ENST00000567392 174 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 RPS29P30-201ENST00000600975 111 ntBASIC-2.29□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD36A-201ENST00000362874 73 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD115-22-201ENST00000364456 82 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 SNORA63.6-201ENST00000364921 119 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-890P-201ENST00000384121 107 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2.3□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-957P-201ENST00000363652 99 ntBASIC-2.31□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-690P-201ENST00000365242 106 ntBASIC-2.31□□□□□ -2.78
HLA-DRB4X5D2U9 MT-TM-201ENST00000387377 68 ntBASIC-2.31□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-510P-201ENST00000391239 108 ntBASIC-2.31□□□□□ -2.78
HLA-DRB4X5D2U9 MIR6888-201ENST00000621977 67 ntBASIC-2.31□□□□□ -2.78
HLA-DRB4X5D2U9 MIR4272-201ENST00000635924 64 ntBASIC-2.31□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD113-8-201ENST00000363497 74 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-662P-201ENST00000384253 104 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-310P-201ENST00000384655 107 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 snoU18.1-201ENST00000629629 71 ntBASIC-2.32□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-935P-201ENST00000410371 100 ntBASIC-2.33□□□□□ -2.78
HLA-DRB4X5D2U9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.33□□□□□ -2.78
HLA-DRB4X5D2U9 HSPE1P25-201ENST00000455484 251 ntBASIC-2.33□□□□□ -2.78
HLA-DRB4X5D2U9 MTND3P3-201ENST00000505004 126 ntBASIC-2.33□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD116-25-201ENST00000516517 92 ntBASIC-2.33□□□□□ -2.78
HLA-DRB4X5D2U9 MIR4696-201ENST00000581431 70 ntBASIC-2.33□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-664P-201ENST00000362381 107 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD38.2-201ENST00000384470 69 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 MIR616-201ENST00000385293 97 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 MTND4LP30-201ENST00000454092 297 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 SNORD42B-201ENST00000458893 67 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 AC093424.1-201ENST00000604999 338 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 AC090582.1-201ENST00000636321 199 ntBASIC-2.34□□□□□ -2.78
HLA-DRB4X5D2U9 RNU6-194P-201ENST00000363862 105 ntBASIC-2.35□□□□□ -2.79
HLA-DRB4X5D2U9 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.35□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-102P-201ENST00000384485 104 ntBASIC-2.35□□□□□ -2.79
HLA-DRB4X5D2U9 MIR34C-201ENST00000384831 77 ntBASIC-2.35□□□□□ -2.79
HLA-DRB4X5D2U9 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.35□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-453P-201ENST00000516819 85 ntBASIC-2.35□□□□□ -2.79
HLA-DRB4X5D2U9 RNU4-90P-201ENST00000362773 141 ntBASIC-2.36□□□□□ -2.79
HLA-DRB4X5D2U9 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.36□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-559P-201ENST00000516151 98 ntBASIC-2.36□□□□□ -2.79
HLA-DRB4X5D2U9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.36□□□□□ -2.79
HLA-DRB4X5D2U9 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.36□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-978P-201ENST00000364371 103 ntBASIC-2.37□□□□□ -2.79
HLA-DRB4X5D2U9 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.37□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-616P-201ENST00000384353 107 ntBASIC-2.37□□□□□ -2.79
HLA-DRB4X5D2U9 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.37□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-79P-201ENST00000362511 107 ntBASIC-2.38□□□□□ -2.79
HLA-DRB4X5D2U9 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.38□□□□□ -2.79
HLA-DRB4X5D2U9 AC138393.2-201ENST00000414742 246 ntBASIC-2.38□□□□□ -2.79
HLA-DRB4X5D2U9 AC090616.4-201ENST00000448026 115 ntBASIC-2.38□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-561P-201ENST00000516222 102 ntBASIC-2.38□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.39□□□□□ -2.79
HLA-DRB4X5D2U9 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.39□□□□□ -2.79
HLA-DRB4X5D2U9 U3.27-201ENST00000391237 200 ntBASIC-2.39□□□□□ -2.79
HLA-DRB4X5D2U9 RNU4-43P-201ENST00000410628 137 ntBASIC-2.39□□□□□ -2.79
HLA-DRB4X5D2U9 RNU7-164P-201ENST00000459221 62 ntBASIC-2.39□□□□□ -2.79
HLA-DRB4X5D2U9 Z99129.1-201ENST00000612510 255 ntBASIC-2.39□□□□□ -2.79
HLA-DRB4X5D2U9 AC073869.6-201ENST00000640656 341 ntBASIC-2.39□□□□□ -2.79
HLA-DRB4X5D2U9 SNORA25.1-201ENST00000362326 128 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 RNU6-235P-201ENST00000362644 107 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 MIR451A-201ENST00000385059 72 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 MIR559-201ENST00000385188 96 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 MIR5690-201ENST00000583739 73 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 MIR3611-201ENST00000584484 83 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 AC021443.1-201ENST00000604478 211 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 AC103591.3-201ENST00000608684 209 ntBASIC-2.4□□□□□ -2.79
HLA-DRB4X5D2U9 RNA5SP93-201ENST00000362525 114 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 RNU6-924P-201ENST00000362926 108 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 RNU6-211P-201ENST00000384047 107 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 RNU4-14P-201ENST00000410858 122 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 AL353691.2-201ENST00000443795 59 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 RNU7-123P-201ENST00000515911 60 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 AL138825.1-201ENST00000618587 192 ntBASIC-2.41□□□□□ -2.8
HLA-DRB4X5D2U9 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.42□□□□□ -2.8
HLA-DRB4X5D2U9 RNU6-647P-201ENST00000364243 107 ntBASIC-2.42□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 271.3 ms