Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MIR3914-2-201ENST00000637339 95 ntBASIC0.41□□□□□ -2.34
LYSMD4Q5XG99 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
LYSMD4Q5XG99 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 RNU6-363P-201ENST00000362895 105 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 RNY4P6-201ENST00000363667 96 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 Y_RNA.178-201ENST00000363832 102 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 MIR518A1-201ENST00000385068 85 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 Y_RNA.649-201ENST00000459077 103 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 Y_RNA.712-201ENST00000517011 92 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 RNA5SP47-201ENST00000517230 109 ntBASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.4□□□□□ -2.35
LYSMD4Q5XG99 SNORD115-24-201ENST00000363528 82 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 Y_RNA.155-201ENST00000363632 101 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 RNU6-816P-201ENST00000390914 107 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 RNU6-1268P-201ENST00000391214 107 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 RNU6-1239P-201ENST00000391310 107 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 RNU7-106P-201ENST00000459514 67 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 RNU6-1333P-201ENST00000516162 93 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 RNA5SP268-201ENST00000516828 124 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 MIR7107-201ENST00000611489 80 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 AL512310.12-203ENST00000640543 90 ntBASIC0.39□□□□□ -2.35
LYSMD4Q5XG99 SNORD118-201ENST00000363593 134 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 Y_RNA.221-201ENST00000364248 96 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 SNORD116-14-201ENST00000383894 92 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 SNORD116-17-201ENST00000383929 92 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 SNORD116-15-201ENST00000384445 92 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 RNU6-959P-201ENST00000384671 107 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 SNORD116-19-201ENST00000384729 92 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 MIR635-201ENST00000384830 98 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 RNU6-1006P-201ENST00000516998 103 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 AC007012.1-201ENST00000567192 175 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 MIR548H5-201ENST00000580314 60 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 AL365222.1-201ENST00000614661 98 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 MIR2909-201ENST00000617113 69 ntBASIC0.38□□□□□ -2.35
LYSMD4Q5XG99 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 SNORD63B-201ENST00000411005 70 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 SNORD71-201ENST00000411292 86 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 AC069271.1-201ENST00000445577 156 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 AC244505.6-201ENST00000452829 130 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 RNU7-195P-201ENST00000458793 62 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 RNU6-850P-201ENST00000516934 103 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 SCARNA16.5-201ENST00000517114 183 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 RNU7-161P-201ENST00000517289 62 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 MIR4639-201ENST00000584938 69 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
LYSMD4Q5XG99 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 RNU6-1229P-201ENST00000364295 107 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 RNU6-409P-201ENST00000384114 104 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 SNRPGP12-201ENST00000449481 213 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 RNA5SP227-201ENST00000516184 113 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 MTND5P40-201ENST00000559945 246 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 AC138869.1-201ENST00000568623 124 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 AL162726.3-218ENST00000636401 95 ntBASIC0.36□□□□□ -2.35
LYSMD4Q5XG99 RNU6-1313P-201ENST00000362622 102 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 Y_RNA.353-201ENST00000365440 108 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 RNU6-81P-201ENST00000365608 104 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 MIR516A2-201ENST00000384888 90 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 MIR516A1-201ENST00000385033 90 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 MIR599-201ENST00000385069 95 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 MIR548A3-201ENST00000385297 97 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 MIR4752-201ENST00000579672 72 ntBASIC0.35□□□□□ -2.35
LYSMD4Q5XG99 Y_RNA.507-201ENST00000384500 99 ntBASIC0.34□□□□□ -2.36
LYSMD4Q5XG99 RNA5SP63-201ENST00000391225 112 ntBASIC0.34□□□□□ -2.36
LYSMD4Q5XG99 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.34□□□□□ -2.36
LYSMD4Q5XG99 TMSB4XP3-201ENST00000445144 114 ntBASIC0.34□□□□□ -2.36
LYSMD4Q5XG99 SPINT5P-201ENST00000448174 155 ntBASIC0.34□□□□□ -2.36
LYSMD4Q5XG99 RNU7-104P-201ENST00000459398 79 ntBASIC0.34□□□□□ -2.36
LYSMD4Q5XG99 Y_RNA.35-201ENST00000362601 101 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 RNU6-170P-201ENST00000362832 104 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 Y_RNA.433-201ENST00000384089 102 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 RNU6-1201P-201ENST00000384227 107 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 MIR577-201ENST00000385196 96 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 MIR548I2-201ENST00000408348 149 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 RNU6-135P-201ENST00000516769 101 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 MIR3613-201ENST00000579844 87 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 MIR3910-1-201ENST00000580936 111 ntBASIC0.33□□□□□ -2.36
LYSMD4Q5XG99 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 RNA5SP403-201ENST00000363598 108 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 RNU6-571P-201ENST00000384128 107 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 MIR548G-201ENST00000408442 89 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 RPL39P34-201ENST00000477141 156 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 Y_RNA.809-201ENST00000516058 95 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 AL670379.3-201ENST00000605040 251 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 MIR6755-201ENST00000619993 66 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 U6.95-201ENST00000636931 70 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 AC091304.10-201ENST00000641554 121 ntBASIC0.32□□□□□ -2.36
LYSMD4Q5XG99 RNU6-726P-201ENST00000364680 107 ntBASIC0.31□□□□□ -2.36
LYSMD4Q5XG99 U8.6-201ENST00000364939 135 ntBASIC0.31□□□□□ -2.36
LYSMD4Q5XG99 Y_RNA.342-201ENST00000365352 113 ntBASIC0.31□□□□□ -2.36
LYSMD4Q5XG99 Y_RNA.423-201ENST00000384057 113 ntBASIC0.31□□□□□ -2.36
LYSMD4Q5XG99 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
LYSMD4Q5XG99 RNU6-1018P-201ENST00000516577 106 ntBASIC0.31□□□□□ -2.36
LYSMD4Q5XG99 AC068339.1-201ENST00000526965 141 ntBASIC0.31□□□□□ -2.36
LYSMD4Q5XG99 MIR4679-2-201ENST00000578358 77 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 278.1 ms