Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 MIR516A1-201ENST00000385033 90 ntBASIC0.2□□□□□ -2.38
HIST1H2ABP04908 SPINT5P-201ENST00000448174 155 ntBASIC0.2□□□□□ -2.38
HIST1H2ABP04908 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.2□□□□□ -2.38
HIST1H2ABP04908 Y_RNA.247-201ENST00000364500 92 ntBASIC0.19□□□□□ -2.38
HIST1H2ABP04908 Y_RNA.507-201ENST00000384500 99 ntBASIC0.19□□□□□ -2.38
HIST1H2ABP04908 RNA5SP193-201ENST00000410353 107 ntBASIC0.19□□□□□ -2.38
HIST1H2ABP04908 AL353813.1-201ENST00000440700 253 ntBASIC0.19□□□□□ -2.38
HIST1H2ABP04908 Y_RNA.35-201ENST00000362601 101 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 RNU6-1313P-201ENST00000362622 102 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 Y_RNA.362-201ENST00000365518 110 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 RNU6-524P-201ENST00000384270 107 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 MIR519A1-201ENST00000385257 85 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 MIR760-201ENST00000390220 80 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 RNU6-816P-201ENST00000390914 107 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 RNU6-1268P-201ENST00000391214 107 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 RNU6-1239P-201ENST00000391310 107 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 MIR1287-201ENST00000408492 90 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 RNU6-1232P-201ENST00000516299 86 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 RNU6-1006P-201ENST00000516998 103 ntBASIC0.18□□□□□ -2.38
HIST1H2ABP04908 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
HIST1H2ABP04908 SNORA2A-201ENST00000383885 135 ntBASIC0.17□□□□□ -2.38
HIST1H2ABP04908 Y_RNA.703-201ENST00000516846 111 ntBASIC0.17□□□□□ -2.38
HIST1H2ABP04908 AL162376.1-201ENST00000624117 175 ntBASIC0.17□□□□□ -2.38
HIST1H2ABP04908 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
HIST1H2ABP04908 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
HIST1H2ABP04908 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
HIST1H2ABP04908 RNU6-1062P-201ENST00000383908 107 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 SNORD41.1-201ENST00000391000 69 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 RNU6-269P-201ENST00000391077 97 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 RNU6-1018P-201ENST00000516577 106 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 RNU6-90P-201ENST00000606352 106 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 RNU1-29P-201ENST00000606574 126 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 AL162726.3-218ENST00000636401 95 ntBASIC0.16□□□□□ -2.38
HIST1H2ABP04908 RNU6-1260P-201ENST00000362944 107 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.218-201ENST00000364218 104 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.226-201ENST00000364337 114 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 RNU6-80P-201ENST00000384195 107 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 MIR548G-201ENST00000408442 89 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 RPL39P34-201ENST00000477141 156 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.15□□□□□ -2.39
HIST1H2ABP04908 SNORA70.25-201ENST00000612741 95 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 MIR499B-201ENST00000636498 73 ntBASIC0.15□□□□□ -2.39
HIST1H2ABP04908 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.85-201ENST00000363014 111 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 SNORD38.1-201ENST00000363863 68 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 MIR613-201ENST00000385248 95 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.649-201ENST00000459077 103 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 RNU6-848P-201ENST00000515948 107 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 RNU6-617P-201ENST00000516147 107 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 RNU6-473P-201ENST00000516164 107 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 RNU6-1049P-201ENST00000516414 107 ntBASIC0.14□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.71-201ENST00000362892 104 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.323-201ENST00000365157 109 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 RNA5SP128-201ENST00000365305 116 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 RNU6-746P-201ENST00000384112 109 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 RNU6-1201P-201ENST00000384227 107 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 MIR548A1-201ENST00000385041 97 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 MIR1912-201ENST00000410389 80 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 RNU6-1265P-201ENST00000516342 103 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 RNU7-13P-201ENST00000516413 62 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 AC007012.1-201ENST00000567192 175 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 MIR3920-201ENST00000581751 86 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 AC022709.1-201ENST00000615967 87 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 AL035470.1-201ENST00000622571 220 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 MIR3914-2-201ENST00000637339 95 ntBASIC0.13□□□□□ -2.39
HIST1H2ABP04908 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
HIST1H2ABP04908 RNU6-1254P-201ENST00000391266 104 ntBASIC0.12□□□□□ -2.39
HIST1H2ABP04908 RNA5SP436-201ENST00000516020 115 ntBASIC0.12□□□□□ -2.39
HIST1H2ABP04908 AL442128.1-201ENST00000615151 90 ntBASIC0.12□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.57-201ENST00000362806 113 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 RNA5SP214-201ENST00000363378 118 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 RNU6-704P-201ENST00000364162 103 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 SNORD50.2-201ENST00000365465 70 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.549-201ENST00000384657 102 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 MIR518E-201ENST00000385252 88 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 RNU6-127P-201ENST00000390897 107 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 RNU6-659P-201ENST00000516454 104 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.712-201ENST00000517011 92 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 MIR6515-201ENST00000619843 57 ntBASIC0.11□□□□□ -2.39
HIST1H2ABP04908 SNORD114-23-201ENST00000363536 72 ntBASIC0.1□□□□□ -2.39
HIST1H2ABP04908 Y_RNA.173-201ENST00000363776 113 ntBASIC0.1□□□□□ -2.39
HIST1H2ABP04908 RNU6-243P-201ENST00000391140 107 ntBASIC0.1□□□□□ -2.39
HIST1H2ABP04908 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.1□□□□□ -2.39
HIST1H2ABP04908 SNORD33.1-201ENST00000516213 88 ntBASIC0.1□□□□□ -2.39
HIST1H2ABP04908 MIR4679-2-201ENST00000578358 77 ntBASIC0.1□□□□□ -2.39
HIST1H2ABP04908 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
HIST1H2ABP04908 SNORD36A-201ENST00000362874 73 ntBASIC0.09□□□□□ -2.4
HIST1H2ABP04908 Y_RNA.309-201ENST00000365046 111 ntBASIC0.09□□□□□ -2.4
HIST1H2ABP04908 AL161932.1-201ENST00000437408 146 ntBASIC0.09□□□□□ -2.4
HIST1H2ABP04908 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
HIST1H2ABP04908 MIR577-201ENST00000385196 96 ntBASIC0.08□□□□□ -2.4
HIST1H2ABP04908 MIR548A3-201ENST00000385297 97 ntBASIC0.08□□□□□ -2.4
HIST1H2ABP04908 MIR5706-201ENST00000579841 80 ntBASIC0.08□□□□□ -2.4
HIST1H2ABP04908 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.08□□□□□ -2.4
HIST1H2ABP04908 SNORD114-5-201ENST00000362928 70 ntBASIC0.07□□□□□ -2.4
HIST1H2ABP04908 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms