Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RPS29P25-201ENST00000481709 171 ntBASIC-3.03□□□□□ -2.89
POLR1AO95602 RNU2-4P-201ENST00000606190 192 ntBASIC-3.04□□□□□ -2.9
POLR1AO95602 AC007485.1-201ENST00000616755 206 ntBASIC-3.04□□□□□ -2.9
POLR1AO95602 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 Y_RNA.441-201ENST00000384123 112 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 RNU4-69P-201ENST00000410677 143 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 RNU6-861P-201ENST00000516745 106 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 RNU6-246P-201ENST00000384702 107 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 RNU6-935P-201ENST00000410371 100 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 RNU7-24P-201ENST00000458867 62 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 DEFB117-201ENST00000602356 141 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 AC013734.1-201ENST00000619329 111 ntBASIC-3.05□□□□□ -2.9
POLR1AO95602 Y_RNA.173-201ENST00000363776 113 ntBASIC-3.06□□□□□ -2.9
POLR1AO95602 RNU6-260P-201ENST00000384092 107 ntBASIC-3.06□□□□□ -2.9
POLR1AO95602 SNORD38.2-201ENST00000384470 69 ntBASIC-3.06□□□□□ -2.9
POLR1AO95602 MIR451A-201ENST00000385059 72 ntBASIC-3.06□□□□□ -2.9
POLR1AO95602 RNU6-990P-201ENST00000364385 104 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 RNU6-1103P-201ENST00000384150 107 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 SNORD78.2-201ENST00000391076 69 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 Y_RNA.691-201ENST00000516611 103 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 RNU6-256P-201ENST00000516747 97 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 MIR4659A-201ENST00000580269 81 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 AP000240.1-201ENST00000609910 452 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 DLEU2_3.1-201ENST00000620005 73 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 Y_RNA.381-201ENST00000365666 102 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 SCARNA15-202ENST00000516881 127 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 RNU6-570P-201ENST00000517051 105 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 MIR548AB-201ENST00000584917 84 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 AL022161.1-201ENST00000604390 213 ntBASIC-3.07□□□□□ -2.9
POLR1AO95602 Y_RNA.3-201ENST00000362331 103 ntBASIC-3.08□□□□□ -2.9
POLR1AO95602 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.08□□□□□ -2.9
POLR1AO95602 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.08□□□□□ -2.9
POLR1AO95602 SNORA33.1-201ENST00000364957 130 ntBASIC-3.08□□□□□ -2.9
POLR1AO95602 RNY4P10-201ENST00000365571 96 ntBASIC-3.08□□□□□ -2.9
POLR1AO95602 U6.97-201ENST00000636904 101 ntBASIC-3.08□□□□□ -2.9
POLR1AO95602 Y_RNA.462-201ENST00000384268 102 ntBASIC-3.09□□□□□ -2.9
POLR1AO95602 RNU6-306P-201ENST00000384617 107 ntBASIC-3.09□□□□□ -2.9
POLR1AO95602 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-3.09□□□□□ -2.9
POLR1AO95602 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.09□□□□□ -2.9
POLR1AO95602 U6.92-201ENST00000636464 89 ntBASIC-3.09□□□□□ -2.9
POLR1AO95602 Y_RNA.389-201ENST00000383924 113 ntBASIC-3.1□□□□□ -2.91
POLR1AO95602 RNU6-191P-201ENST00000516295 94 ntBASIC-3.1□□□□□ -2.91
POLR1AO95602 AL365205.2-201ENST00000594586 68 ntBASIC-3.1□□□□□ -2.91
POLR1AO95602 RNU6-845P-201ENST00000362578 103 ntBASIC-3.1□□□□□ -2.91
POLR1AO95602 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.1□□□□□ -2.91
POLR1AO95602 MTND2P39-201ENST00000457230 764 ntBASIC-3.1□□□□□ -2.91
POLR1AO95602 PISRT1.1-201ENST00000616930 107 ntBASIC-3.1□□□□□ -2.91
POLR1AO95602 RNU6-1252P-201ENST00000363054 104 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 RNU1-115P-201ENST00000365329 160 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 RNU6-636P-201ENST00000384598 107 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 MIR520D-201ENST00000385002 87 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 Y_RNA.655-201ENST00000515919 96 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 MIR3913-1-201ENST00000577744 102 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 AC005014.2-201ENST00000607795 599 ntBASIC-3.11□□□□□ -2.91
POLR1AO95602 Y_RNA.143-201ENST00000363520 106 ntBASIC-3.12□□□□□ -2.91
POLR1AO95602 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.12□□□□□ -2.91
POLR1AO95602 RNU6-1156P-201ENST00000410365 100 ntBASIC-3.12□□□□□ -2.91
POLR1AO95602 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.12□□□□□ -2.91
POLR1AO95602 AC073869.6-201ENST00000640656 341 ntBASIC-3.12□□□□□ -2.91
POLR1AO95602 Y_RNA.394-201ENST00000383942 103 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 MIR509-1-201ENST00000385265 94 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 MIR509-2-201ENST00000390724 91 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 RNU6-764P-201ENST00000516396 105 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 MIR1244-1-201ENST00000612829 85 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 MIR1244-3-201ENST00000635744 85 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 MIR1244-2-201ENST00000636449 85 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 MIR1244-4-202ENST00000636813 85 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 TPTEP1-208ENST00000636884 213 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 RNU6-763P-201ENST00000390865 106 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 RNU2-38P-201ENST00000410856 79 ntBASIC-3.13□□□□□ -2.91
POLR1AO95602 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-3.13□□□□□ -2.91
POLR1AO95602 Y_RNA.301-201ENST00000364990 103 ntBASIC-3.14□□□□□ -2.91
POLR1AO95602 AL593851.1-201ENST00000426171 157 ntBASIC-3.14□□□□□ -2.91
POLR1AO95602 MTND3P12-201ENST00000559068 328 ntBASIC-3.14□□□□□ -2.91
POLR1AO95602 AL021368.1-201ENST00000607490 540 ntBASIC-3.14□□□□□ -2.91
POLR1AO95602 MIR367-201ENST00000362299 68 ntBASIC-3.15□□□□□ -2.91
POLR1AO95602 MIR521-2-201ENST00000384818 87 ntBASIC-3.15□□□□□ -2.91
POLR1AO95602 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.15□□□□□ -2.91
POLR1AO95602 RBMX2P4-201ENST00000441256 376 ntBASIC-3.15□□□□□ -2.91
POLR1AO95602 AC005899.2-201ENST00000584353 90 ntBASIC-3.15□□□□□ -2.91
POLR1AO95602 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 RNU6-1059P-201ENST00000363752 98 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 SNORD77B-201ENST00000391112 67 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 RNA5SP106-201ENST00000517274 100 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 MTATP6P25-201ENST00000574491 261 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 AC018645.2-201ENST00000609151 472 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-3.16□□□□□ -2.91
POLR1AO95602 RNU6-682P-201ENST00000363843 106 ntBASIC-3.16□□□□□ -2.92
POLR1AO95602 RNU6-99P-201ENST00000364721 107 ntBASIC-3.16□□□□□ -2.92
POLR1AO95602 MIR548A1-201ENST00000385041 97 ntBASIC-3.16□□□□□ -2.92
POLR1AO95602 RNU2-35P-201ENST00000516446 142 ntBASIC-3.16□□□□□ -2.92
POLR1AO95602 MTCO2P4-201ENST00000517968 247 ntBASIC-3.16□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms