Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 SNORD116-14-201ENST00000383894 92 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 SNORD116-17-201ENST00000383929 92 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 RNU6-571P-201ENST00000384128 107 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 SNORD116-15-201ENST00000384445 92 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 SNORD116-19-201ENST00000384729 92 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 MIR34C-201ENST00000384831 77 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 MIR1912-201ENST00000410389 80 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 SNORA7.5-201ENST00000410672 110 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 RPL39P34-201ENST00000477141 156 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 RNU6-659P-201ENST00000516454 104 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 RNU6-1018P-201ENST00000516577 106 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 RNA5SP47-201ENST00000517230 109 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 MIR4679-2-201ENST00000578358 77 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 AC091304.10-201ENST00000641554 121 ntBASIC0.35□□□□□ -2.35
PRDM1O75626 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
PRDM1O75626 RNU6-1313P-201ENST00000362622 102 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 Y_RNA.85-201ENST00000363014 111 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 Y_RNA.155-201ENST00000363632 101 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 Y_RNA.218-201ENST00000364218 104 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 RNA5SP245-201ENST00000364239 121 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 Y_RNA.362-201ENST00000365518 110 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 BX276092.1-201ENST00000427368 251 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 Y_RNA.649-201ENST00000459077 103 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 RNA5SP268-201ENST00000516828 124 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 MIR6828-201ENST00000636181 60 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 AL162726.3-218ENST00000636401 95 ntBASIC0.34□□□□□ -2.36
PRDM1O75626 Y_RNA.49-201ENST00000362714 112 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNU6-170P-201ENST00000362832 104 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 SNORA36.1-201ENST00000363424 132 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 SNORD115-24-201ENST00000363528 82 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 Y_RNA.309-201ENST00000365046 111 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNU6-959P-201ENST00000384671 107 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNU6-816P-201ENST00000390914 107 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNU6-1268P-201ENST00000391214 107 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNU6-1239P-201ENST00000391310 107 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 AC097635.1-201ENST00000450678 155 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNA5SP227-201ENST00000516184 113 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 MTND5P40-201ENST00000559945 246 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 AC244669.1-204ENST00000621564 178 ntBASIC0.33□□□□□ -2.36
PRDM1O75626 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 RNU6-81P-201ENST00000365608 104 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 MIR519A1-201ENST00000385257 85 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 MIR548A3-201ENST00000385297 97 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 SUMO1P3-201ENST00000439961 304 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 SNRPGP12-201ENST00000449481 213 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 TRAJ51-201ENST00000504127 63 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 AC007012.1-201ENST00000567192 175 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 SNORA25.18-201ENST00000607153 114 ntBASIC0.32□□□□□ -2.36
PRDM1O75626 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
PRDM1O75626 SNORD38.1-201ENST00000363863 68 ntBASIC0.31□□□□□ -2.36
PRDM1O75626 Y_RNA.525-201ENST00000384570 113 ntBASIC0.31□□□□□ -2.36
PRDM1O75626 MIR599-201ENST00000385069 95 ntBASIC0.31□□□□□ -2.36
PRDM1O75626 AC008267.6-201ENST00000441664 139 ntBASIC0.31□□□□□ -2.36
PRDM1O75626 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.31□□□□□ -2.36
PRDM1O75626 AL670379.3-201ENST00000605040 251 ntBASIC0.31□□□□□ -2.36
PRDM1O75626 Y_RNA.342-201ENST00000365352 113 ntBASIC0.3□□□□□ -2.36
PRDM1O75626 SNORD63B-201ENST00000411005 70 ntBASIC0.3□□□□□ -2.36
PRDM1O75626 RNU6-1333P-201ENST00000516162 93 ntBASIC0.3□□□□□ -2.36
PRDM1O75626 RNU6-850P-201ENST00000516934 103 ntBASIC0.3□□□□□ -2.36
PRDM1O75626 MIR2909-201ENST00000617113 69 ntBASIC0.3□□□□□ -2.36
PRDM1O75626 AL603908.1-201ENST00000406098 201 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 MIR548L-201ENST00000408303 86 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 SPINT5P-201ENST00000448174 155 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 Y_RNA.809-201ENST00000516058 95 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 SNORD33.1-201ENST00000516213 88 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 AC096720.1-201ENST00000604441 183 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 RNU6-90P-201ENST00000606352 106 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 MIR7107-201ENST00000611489 80 ntBASIC0.29□□□□□ -2.36
PRDM1O75626 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 Y_RNA.563-201ENST00000384707 108 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 MIR548A1-201ENST00000385041 97 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 MIR548G-201ENST00000408442 89 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 RNU6-1006P-201ENST00000516998 103 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 AL442128.1-201ENST00000615151 90 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 AC067863.3-201ENST00000624172 122 ntBASIC0.28□□□□□ -2.36
PRDM1O75626 RNU6-1260P-201ENST00000362944 107 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 RNA5SP257-201ENST00000363023 116 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 RNA5SP403-201ENST00000363598 108 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 RNU6-1126P-201ENST00000384002 107 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 RNU6-1201P-201ENST00000384227 107 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 AL353813.1-201ENST00000440700 253 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 RNU7-104P-201ENST00000459398 79 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 RNU6-62P-201ENST00000516526 102 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 AL035470.1-201ENST00000622571 220 ntBASIC0.27□□□□□ -2.37
PRDM1O75626 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.27□□□□□ -2.37
PRDM1O75626 Y_RNA.35-201ENST00000362601 101 ntBASIC0.26□□□□□ -2.37
PRDM1O75626 Y_RNA.221-201ENST00000364248 96 ntBASIC0.26□□□□□ -2.37
PRDM1O75626 Y_RNA.353-201ENST00000365440 108 ntBASIC0.26□□□□□ -2.37
PRDM1O75626 Y_RNA.377-201ENST00000365644 108 ntBASIC0.26□□□□□ -2.37
PRDM1O75626 RNU6-1117P-201ENST00000384525 104 ntBASIC0.26□□□□□ -2.37
PRDM1O75626 RNU7-195P-201ENST00000458793 62 ntBASIC0.26□□□□□ -2.37
PRDM1O75626 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.26□□□□□ -2.37
PRDM1O75626 RNU6-848P-201ENST00000515948 107 ntBASIC0.26□□□□□ -2.37
PRDM1O75626 RNU6-617P-201ENST00000516147 107 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms