Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MIR193B-201ENST00000384907 83 ntBASIC0.55□□□□□ -2.32
USP44Q9H0E7 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
USP44Q9H0E7 RNU7-48P-201ENST00000458875 63 ntBASIC0.55□□□□□ -2.32
USP44Q9H0E7 RNU6-1061P-201ENST00000516530 99 ntBASIC0.55□□□□□ -2.32
USP44Q9H0E7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
USP44Q9H0E7 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
USP44Q9H0E7 RNA5SP325-201ENST00000363756 130 ntBASIC0.54□□□□□ -2.32
USP44Q9H0E7 SNORD115-35-201ENST00000365122 82 ntBASIC0.54□□□□□ -2.32
USP44Q9H0E7 RNU6-469P-201ENST00000516253 101 ntBASIC0.54□□□□□ -2.32
USP44Q9H0E7 RNA5SP94-201ENST00000516917 108 ntBASIC0.54□□□□□ -2.32
USP44Q9H0E7 AC025166.1-201ENST00000612411 163 ntBASIC0.54□□□□□ -2.32
USP44Q9H0E7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
USP44Q9H0E7 MIR539-201ENST00000365690 78 ntBASIC0.53□□□□□ -2.32
USP44Q9H0E7 RNU6-187P-201ENST00000384139 106 ntBASIC0.53□□□□□ -2.32
USP44Q9H0E7 RNU6-429P-201ENST00000384582 108 ntBASIC0.53□□□□□ -2.32
USP44Q9H0E7 MIR759-201ENST00000390224 91 ntBASIC0.53□□□□□ -2.32
USP44Q9H0E7 Y_RNA.630-201ENST00000411370 108 ntBASIC0.53□□□□□ -2.32
USP44Q9H0E7 AC010487.4-201ENST00000637027 61 ntBASIC0.53□□□□□ -2.32
USP44Q9H0E7 Y_RNA.98-201ENST00000363109 102 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 RNA5SP245-201ENST00000364239 121 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 Y_RNA.328-201ENST00000365208 113 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 SNORD50.2-201ENST00000365465 70 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 RNU7-107P-201ENST00000459121 61 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 RNU6-772P-201ENST00000516042 105 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 MIR1273G-201ENST00000577677 100 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 MIR1255B1-201ENST00000636325 63 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.52□□□□□ -2.33
USP44Q9H0E7 MTND5P18-201ENST00000445624 1801 ntBASIC0.52□□□□□ -2.33
USP44Q9H0E7 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 MIR101-2-201ENST00000362195 79 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 Y_RNA.127-201ENST00000363386 109 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 SNORD18A-201ENST00000363753 72 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 RNA5SP517-201ENST00000364724 117 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 Y_RNA.525-201ENST00000384570 113 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 MIR4500-201ENST00000579472 76 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 MIR376B-201ENST00000614515 100 ntBASIC0.51□□□□□ -2.33
USP44Q9H0E7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 SNORA63.5-201ENST00000363548 123 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 RNU6-704P-201ENST00000364162 103 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 RNU6-865P-201ENST00000364772 107 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 MIR548D2-201ENST00000384955 97 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 RNU6-863P-201ENST00000515989 104 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 RNU6-521P-201ENST00000516663 105 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 AP001362.1-201ENST00000625165 124 ntBASIC0.5□□□□□ -2.33
USP44Q9H0E7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
USP44Q9H0E7 SNORA36.1-201ENST00000363424 132 ntBASIC0.49□□□□□ -2.33
USP44Q9H0E7 Y_RNA.218-201ENST00000364218 104 ntBASIC0.49□□□□□ -2.33
USP44Q9H0E7 SNORD71-201ENST00000411292 86 ntBASIC0.49□□□□□ -2.33
USP44Q9H0E7 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
USP44Q9H0E7 AL157777.2-201ENST00000258070 137 ntBASIC0.48□□□□□ -2.33
USP44Q9H0E7 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
USP44Q9H0E7 Y_RNA.344-201ENST00000365381 112 ntBASIC0.47□□□□□ -2.33
USP44Q9H0E7 Y_RNA.346-201ENST00000365385 112 ntBASIC0.47□□□□□ -2.33
USP44Q9H0E7 RNU6-80P-201ENST00000384195 107 ntBASIC0.47□□□□□ -2.33
USP44Q9H0E7 SNORA8.2-201ENST00000384372 139 ntBASIC0.47□□□□□ -2.33
USP44Q9H0E7 MIR34C-201ENST00000384831 77 ntBASIC0.47□□□□□ -2.33
USP44Q9H0E7 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
USP44Q9H0E7 Y_RNA.71-201ENST00000362892 104 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 RNY4P6-201ENST00000363667 96 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 SNORD28-201ENST00000384706 75 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 BX276092.1-201ENST00000427368 251 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
USP44Q9H0E7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.46□□□□□ -2.34
USP44Q9H0E7 RNA5SP47-201ENST00000517230 109 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 MIR548H5-201ENST00000580314 60 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 SNORA25.18-201ENST00000607153 114 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 MIR924-201ENST00000638017 53 ntBASIC0.46□□□□□ -2.34
USP44Q9H0E7 RNU4-67P-201ENST00000364569 141 ntBASIC0.45□□□□□ -2.34
USP44Q9H0E7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.45□□□□□ -2.34
USP44Q9H0E7 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
USP44Q9H0E7 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
USP44Q9H0E7 MIR548M-201ENST00000408260 86 ntBASIC0.45□□□□□ -2.34
USP44Q9H0E7 MIR4639-201ENST00000584938 69 ntBASIC0.45□□□□□ -2.34
USP44Q9H0E7 MIR3914-2-201ENST00000637339 95 ntBASIC0.45□□□□□ -2.34
USP44Q9H0E7 RNU6-363P-201ENST00000362895 105 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 SNORD118-201ENST00000363593 134 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 SNORA7.5-201ENST00000410672 110 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 SUMO1P3-201ENST00000439961 304 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 AC244505.6-201ENST00000452829 130 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 RNU6-659P-201ENST00000516454 104 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 RNA5SP268-201ENST00000516828 124 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 Y_RNA.712-201ENST00000517011 92 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 AC138869.1-201ENST00000568623 124 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 RNU7-10P-201ENST00000607194 63 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 AC244669.1-204ENST00000621564 178 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 MIR6828-201ENST00000636181 60 ntBASIC0.44□□□□□ -2.34
USP44Q9H0E7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
USP44Q9H0E7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.43□□□□□ -2.34
USP44Q9H0E7 MIR635-201ENST00000384830 98 ntBASIC0.43□□□□□ -2.34
USP44Q9H0E7 AL353813.1-201ENST00000440700 253 ntBASIC0.43□□□□□ -2.34
USP44Q9H0E7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
USP44Q9H0E7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms