Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNORD116-14-201ENST00000383894 92 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 SNORD116-17-201ENST00000383929 92 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 SNORD116-15-201ENST00000384445 92 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 SNORD116-19-201ENST00000384729 92 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 RNU6-1307P-201ENST00000391012 103 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 SNORA31.14-201ENST00000516728 116 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 RNU6-135P-201ENST00000516769 101 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.712-201ENST00000517011 92 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 uc_338.16-201ENST00000621804 95 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 MIR1255B1-201ENST00000636325 63 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.127-201ENST00000363386 109 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.525-201ENST00000384570 113 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 AL603908.1-201ENST00000406098 201 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 RNU7-10P-201ENST00000607194 63 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 MIR376B-201ENST00000614515 100 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 U6.95-201ENST00000636931 70 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 MIR3914-2-201ENST00000637339 95 ntBASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
CHMP4CQ96CF2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CHMP4CQ96CF2 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.507-201ENST00000384500 99 ntBASIC0.75□□□□□ -2.29
CHMP4CQ96CF2 MIR644A-201ENST00000385262 94 ntBASIC0.75□□□□□ -2.29
CHMP4CQ96CF2 RNU6-659P-201ENST00000516454 104 ntBASIC0.75□□□□□ -2.29
CHMP4CQ96CF2 RNU6-229P-201ENST00000516614 102 ntBASIC0.75□□□□□ -2.29
CHMP4CQ96CF2 MIR548H5-201ENST00000580314 60 ntBASIC0.75□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.56-201ENST00000362798 112 ntBASIC0.74□□□□□ -2.29
CHMP4CQ96CF2 RNU4-67P-201ENST00000364569 141 ntBASIC0.74□□□□□ -2.29
CHMP4CQ96CF2 RNU6-945P-201ENST00000383947 107 ntBASIC0.74□□□□□ -2.29
CHMP4CQ96CF2 SNORD38.2-201ENST00000384470 69 ntBASIC0.74□□□□□ -2.29
CHMP4CQ96CF2 SNORA7.5-201ENST00000410672 110 ntBASIC0.74□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.649-201ENST00000459077 103 ntBASIC0.74□□□□□ -2.29
CHMP4CQ96CF2 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
CHMP4CQ96CF2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.73□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.344-201ENST00000365381 112 ntBASIC0.73□□□□□ -2.29
CHMP4CQ96CF2 RNU6-959P-201ENST00000384671 107 ntBASIC0.73□□□□□ -2.29
CHMP4CQ96CF2 AC018659.1-201ENST00000551083 169 ntBASIC0.73□□□□□ -2.29
CHMP4CQ96CF2 AC092634.7-201ENST00000621022 103 ntBASIC0.73□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.155-201ENST00000363632 101 ntBASIC0.72□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.72□□□□□ -2.29
CHMP4CQ96CF2 RNU6-1333P-201ENST00000516162 93 ntBASIC0.72□□□□□ -2.29
CHMP4CQ96CF2 RNA5SP94-201ENST00000516917 108 ntBASIC0.72□□□□□ -2.29
CHMP4CQ96CF2 uc_338.17-201ENST00000619633 179 ntBASIC0.72□□□□□ -2.29
CHMP4CQ96CF2 AL512310.12-203ENST00000640543 90 ntBASIC0.72□□□□□ -2.29
CHMP4CQ96CF2 RNU6-363P-201ENST00000362895 105 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 Y_RNA.360-201ENST00000365512 102 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 Y_RNA.362-201ENST00000365518 110 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 RNU6-409P-201ENST00000384114 104 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 MIR34C-201ENST00000384831 77 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 MIR548A3-201ENST00000385297 97 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 AC008267.6-201ENST00000441664 139 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 SNORD33.1-201ENST00000516213 88 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 RNU4-54P-201ENST00000516428 129 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 RN7SL793P-201ENST00000583259 296 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 MIR6513-201ENST00000621188 64 ntBASIC0.71□□□□□ -2.3
CHMP4CQ96CF2 SNORA63.5-201ENST00000363548 123 ntBASIC0.7□□□□□ -2.3
CHMP4CQ96CF2 RNU6-81P-201ENST00000365608 104 ntBASIC0.7□□□□□ -2.3
CHMP4CQ96CF2 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
CHMP4CQ96CF2 AC138869.1-201ENST00000568623 124 ntBASIC0.7□□□□□ -2.3
CHMP4CQ96CF2 MIR635-201ENST00000384830 98 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 RNU6-816P-201ENST00000390914 107 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 RNU6-1268P-201ENST00000391214 107 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 RNU6-1239P-201ENST00000391310 107 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 MIR1912-201ENST00000410389 80 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 SNORD71-201ENST00000411292 86 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 BX276092.1-201ENST00000427368 251 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 AC007012.1-201ENST00000567192 175 ntBASIC0.69□□□□□ -2.3
CHMP4CQ96CF2 SNORD18A-201ENST00000363753 72 ntBASIC0.68□□□□□ -2.3
CHMP4CQ96CF2 RNY1P4-201ENST00000384595 115 ntBASIC0.68□□□□□ -2.3
CHMP4CQ96CF2 MIR216A-201ENST00000385063 110 ntBASIC0.68□□□□□ -2.3
CHMP4CQ96CF2 RPL39P34-201ENST00000477141 156 ntBASIC0.68□□□□□ -2.3
CHMP4CQ96CF2 AL670379.3-201ENST00000605040 251 ntBASIC0.68□□□□□ -2.3
CHMP4CQ96CF2 AL162726.3-218ENST00000636401 95 ntBASIC0.68□□□□□ -2.3
CHMP4CQ96CF2 MIR548I2-201ENST00000408348 149 ntBASIC0.67□□□□□ -2.3
CHMP4CQ96CF2 AC092628.1-201ENST00000436250 252 ntBASIC0.67□□□□□ -2.3
CHMP4CQ96CF2 RN7SKP12-201ENST00000516275 143 ntBASIC0.67□□□□□ -2.3
CHMP4CQ96CF2 MTND5P40-201ENST00000559945 246 ntBASIC0.67□□□□□ -2.3
CHMP4CQ96CF2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.67□□□□□ -2.3
CHMP4CQ96CF2 MIR4639-201ENST00000584938 69 ntBASIC0.67□□□□□ -2.3
CHMP4CQ96CF2 MIR6779-201ENST00000617283 64 ntBASIC0.67□□□□□ -2.3
CHMP4CQ96CF2 Y_RNA.85-201ENST00000363014 111 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 RNA5SP245-201ENST00000364239 121 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 Y_RNA.309-201ENST00000365046 111 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 MIR548A1-201ENST00000385041 97 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 AL157398.1-201ENST00000452981 186 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 MIR4679-2-201ENST00000578358 77 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 AC132825.6-201ENST00000638861 357 ntBASIC0.66□□□□□ -2.3
CHMP4CQ96CF2 RNU6-1313P-201ENST00000362622 102 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 RNA5SP517-201ENST00000364724 117 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 RNU6-571P-201ENST00000384128 107 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 RNA5SP193-201ENST00000410353 107 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 SNORA40.8-201ENST00000411034 126 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 RNU6-1018P-201ENST00000516577 106 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 MIR3910-1-201ENST00000580936 111 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
CHMP4CQ96CF2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CHMP4CQ96CF2 RNU6-62P-201ENST00000516526 102 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms