Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 Y_RNA.49-201ENST00000362714 112 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 Y_RNA.540-201ENST00000384638 111 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 RNA5SP227-201ENST00000516184 113 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 MIR548H5-201ENST00000580314 60 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 RNU7-10P-201ENST00000607194 63 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 U7.2-201ENST00000607576 63 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 AC244669.1-204ENST00000621564 178 ntBASIC0.29□□□□□ -2.36
LDB1Q86U70 RNU6-235P-201ENST00000362644 107 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 SNORD114-26-201ENST00000363543 72 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 Y_RNA.180-201ENST00000363867 113 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 RNU6-865P-201ENST00000364772 107 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 MIR759-201ENST00000390224 91 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 AL158147.1-201ENST00000443970 75 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 RNU7-200P-201ENST00000516105 62 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 RNU6-255P-201ENST00000516957 105 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 AC138869.1-201ENST00000568623 124 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 MIR3163-201ENST00000581592 73 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 MIR7107-201ENST00000611489 80 ntBASIC0.28□□□□□ -2.36
LDB1Q86U70 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
LDB1Q86U70 SNORD115-35-201ENST00000365122 82 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 Y_RNA.464-201ENST00000384282 110 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 MIR193B-201ENST00000384907 83 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 BX276092.1-201ENST00000427368 251 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 RNU6-346P-201ENST00000516288 111 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 RNU6-781P-201ENST00000516377 101 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 MIR3668-201ENST00000582138 75 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 AC087741.2-201ENST00000619415 172 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 AP001362.1-201ENST00000625165 124 ntBASIC0.27□□□□□ -2.37
LDB1Q86U70 RNA5SP62-201ENST00000363457 110 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 SNORD115-24-201ENST00000363528 82 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 Y_RNA.213-201ENST00000364178 111 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 Y_RNA.328-201ENST00000365208 113 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 Y_RNA.466-201ENST00000384294 113 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 AC244505.6-201ENST00000452829 130 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 RNU6-1061P-201ENST00000516530 99 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 Y_RNA.773-201ENST00000607168 90 ntBASIC0.26□□□□□ -2.37
LDB1Q86U70 Y_RNA.198-201ENST00000364013 98 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 Y_RNA.343-201ENST00000365354 112 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 RNU6-716P-201ENST00000365621 103 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 Y_RNA.528-201ENST00000384575 108 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 RNU6-735P-201ENST00000410612 107 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 RNA5SP136-201ENST00000410906 107 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 MTND4LP9-201ENST00000427694 174 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 AC069271.1-201ENST00000445577 156 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 MIR376B-201ENST00000614515 100 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 TUG1_4.1-201ENST00000619464 181 ntBASIC0.25□□□□□ -2.37
LDB1Q86U70 Y_RNA.127-201ENST00000363386 109 ntBASIC0.24□□□□□ -2.37
LDB1Q86U70 Y_RNA.280-201ENST00000364765 112 ntBASIC0.24□□□□□ -2.37
LDB1Q86U70 MIR635-201ENST00000384830 98 ntBASIC0.24□□□□□ -2.37
LDB1Q86U70 RNU6-521P-201ENST00000516663 105 ntBASIC0.24□□□□□ -2.37
LDB1Q86U70 MIR1255B1-201ENST00000636325 63 ntBASIC0.24□□□□□ -2.37
LDB1Q86U70 Y_RNA.205-201ENST00000364128 113 ntBASIC0.23□□□□□ -2.37
LDB1Q86U70 Y_RNA.423-201ENST00000384057 113 ntBASIC0.23□□□□□ -2.37
LDB1Q86U70 MIR34C-201ENST00000384831 77 ntBASIC0.23□□□□□ -2.37
LDB1Q86U70 MIR548L-201ENST00000408303 86 ntBASIC0.23□□□□□ -2.37
LDB1Q86U70 AC073261.1-201ENST00000429409 121 ntBASIC0.23□□□□□ -2.37
LDB1Q86U70 TRAJ51-201ENST00000504127 63 ntBASIC0.23□□□□□ -2.37
LDB1Q86U70 MIR1273G-201ENST00000577677 100 ntBASIC0.23□□□□□ -2.37
LDB1Q86U70 SNORD115-19-201ENST00000363098 82 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 SNORD115-18-201ENST00000363293 82 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 SNORD115-17-201ENST00000364612 82 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 RNU6-1126P-201ENST00000384002 107 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 RNU6-209P-201ENST00000384118 107 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 SNORA40-201ENST00000388090 126 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 MIR548I2-201ENST00000408348 149 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 RNU6-257P-201ENST00000410238 98 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 SNORA7.5-201ENST00000410672 110 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 RNU7-104P-201ENST00000459398 79 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 RNU6-1234P-201ENST00000516877 103 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 RNU6-1212P-201ENST00000517023 104 ntBASIC0.22□□□□□ -2.37
LDB1Q86U70 Y_RNA.221-201ENST00000364248 96 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-187P-201ENST00000384139 106 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 Y_RNA.506-201ENST00000384494 102 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 Y_RNA.568-201ENST00000384742 113 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 MIR599-201ENST00000385069 95 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-907P-201ENST00000390924 102 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-1211P-201ENST00000459179 105 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-848P-201ENST00000515948 107 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-617P-201ENST00000516147 107 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-473P-201ENST00000516164 107 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 RNU6-1049P-201ENST00000516414 107 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 AC025166.1-201ENST00000612411 163 ntBASIC0.21□□□□□ -2.38
LDB1Q86U70 Y_RNA.360-201ENST00000365512 102 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 MIR548D2-201ENST00000384955 97 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 MIR7-2-201ENST00000384970 110 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 RNU7-161P-201ENST00000517289 62 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 MIR4752-201ENST00000579672 72 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 MIR6779-201ENST00000617283 64 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
LDB1Q86U70 SNORD58C-201ENST00000365223 64 ntBASIC0.19□□□□□ -2.38
LDB1Q86U70 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
LDB1Q86U70 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.19□□□□□ -2.38
LDB1Q86U70 RNU7-129P-201ENST00000516128 62 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms