Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC022079.1-201ENST00000621546 602 ntBASIC-1.84□□□□□ -2.7
HIST1H3AP68431 AL606534.2-204ENST00000635008 178 ntBASIC-1.84□□□□□ -2.7
HIST1H3AP68431 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 RNU6-576P-201ENST00000390854 102 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 RNU4-69P-201ENST00000410677 143 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 RNU6-561P-201ENST00000516222 102 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 RNU2-35P-201ENST00000516446 142 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 RNU2-4P-201ENST00000606190 192 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.85□□□□□ -2.71
HIST1H3AP68431 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
HIST1H3AP68431 RNU6-208P-201ENST00000362431 107 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 RNU6-290P-201ENST00000365212 101 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 RNU6-690P-201ENST00000365242 106 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 MIR624-201ENST00000385217 97 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 RNU7-2P-201ENST00000516096 62 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 RNU6-559P-201ENST00000516151 98 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 SNORD116-25-201ENST00000516517 92 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 MIR3908-201ENST00000579798 126 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 MIR376B-201ENST00000614515 100 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 AC087741.2-201ENST00000619415 172 ntBASIC-1.86□□□□□ -2.71
HIST1H3AP68431 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 RNU6-728P-201ENST00000365375 104 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 RNU6-746P-201ENST00000384112 109 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 SNORD77B-201ENST00000391112 67 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 RNU4-61P-201ENST00000411243 107 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 MIR4520-1-201ENST00000582609 70 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 SNORD58B-201ENST00000607313 66 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 MIR6129-201ENST00000616087 109 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 MIR6818-201ENST00000621576 65 ntBASIC-1.87□□□□□ -2.71
HIST1H3AP68431 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.88□□□□□ -2.71
HIST1H3AP68431 SNORA62.4-201ENST00000365504 151 ntBASIC-1.88□□□□□ -2.71
HIST1H3AP68431 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.88□□□□□ -2.71
HIST1H3AP68431 AL353803.5-201ENST00000599815 141 ntBASIC-1.88□□□□□ -2.71
HIST1H3AP68431 AC112487.2-201ENST00000637950 304 ntBASIC-1.88□□□□□ -2.71
HIST1H3AP68431 RNU6-845P-201ENST00000362578 103 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 RNU6-326P-201ENST00000365480 107 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 RNU6-472P-201ENST00000384299 107 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 SNORD115-46-201ENST00000390982 71 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 SNORD42B-201ENST00000458893 67 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 AC026421.1-201ENST00000519101 163 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 MIR4464-201ENST00000580818 92 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 AC104985.2-201ENST00000620598 500 ntBASIC-1.89□□□□□ -2.71
HIST1H3AP68431 RNU6-957P-201ENST00000363652 99 ntBASIC-1.9□□□□□ -2.71
HIST1H3AP68431 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.9□□□□□ -2.71
HIST1H3AP68431 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.9□□□□□ -2.71
HIST1H3AP68431 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.9□□□□□ -2.71
HIST1H3AP68431 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.9□□□□□ -2.71
HIST1H3AP68431 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.9□□□□□ -2.71
HIST1H3AP68431 AC025253.1-201ENST00000613623 543 ntBASIC-1.9□□□□□ -2.71
HIST1H3AP68431 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.9□□□□□ -2.71
HIST1H3AP68431 SNORD27-201ENST00000363981 72 ntBASIC-1.91□□□□□ -2.72
HIST1H3AP68431 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.91□□□□□ -2.72
HIST1H3AP68431 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.91□□□□□ -2.72
HIST1H3AP68431 SNORD63.1-201ENST00000516178 80 ntBASIC-1.91□□□□□ -2.72
HIST1H3AP68431 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.91□□□□□ -2.72
HIST1H3AP68431 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 SNORD114-4-201ENST00000363962 75 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 RNU6-978P-201ENST00000364371 103 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 MIR216B-201ENST00000390186 82 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 MIR4308-201ENST00000580634 81 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 MIR6888-201ENST00000621977 67 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 MTND4LP32-201ENST00000636111 270 ntBASIC-1.92□□□□□ -2.72
HIST1H3AP68431 SNORD36A-201ENST00000362874 73 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 RNU1-115P-201ENST00000365329 160 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 MIR29B1-201ENST00000385015 81 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 RNU6-243P-201ENST00000391140 107 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 RNA5SP266-201ENST00000410273 108 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 SNORD57-201ENST00000448188 72 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 AC002553.4-201ENST00000616896 331 ntBASIC-1.93□□□□□ -2.72
HIST1H3AP68431 RNU6-226P-201ENST00000363778 107 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 RNU4-43P-201ENST00000410628 137 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 MTND1P29-201ENST00000448112 647 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.94□□□□□ -2.72
HIST1H3AP68431 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 MIR4770-201ENST00000579149 58 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 MIR4696-201ENST00000581431 70 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 AC113139.1-201ENST00000605049 239 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 U4.5-201ENST00000617137 123 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 AL445584.3-201ENST00000617173 78 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 AC091912.2-201ENST00000624798 167 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 MIR4320-201ENST00000636981 65 ntBASIC-1.94□□□□□ -2.72
HIST1H3AP68431 RNU4-32P-201ENST00000363404 141 ntBASIC-1.95□□□□□ -2.72
HIST1H3AP68431 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.95□□□□□ -2.72
HIST1H3AP68431 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.95□□□□□ -2.72
HIST1H3AP68431 SNORD101-201ENST00000384027 73 ntBASIC-1.95□□□□□ -2.72
HIST1H3AP68431 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.95□□□□□ -2.72
HIST1H3AP68431 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.95□□□□□ -2.72
HIST1H3AP68431 MIR34C-201ENST00000384831 77 ntBASIC-1.95□□□□□ -2.72
HIST1H3AP68431 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.95□□□□□ -2.72
HIST1H3AP68431 YWHAEP3-201ENST00000582767 121 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 264.8 ms