Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RNU6-257P-201ENST00000410238 98 ntBASIC0.33□□□□□ -2.36
GDF1P27539 RNU7-2P-201ENST00000516096 62 ntBASIC0.33□□□□□ -2.36
GDF1P27539 RNY1P5-201ENST00000383890 115 ntBASIC0.32□□□□□ -2.36
GDF1P27539 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
GDF1P27539 RNU7-48P-201ENST00000458875 63 ntBASIC0.32□□□□□ -2.36
GDF1P27539 RNA5SP47-201ENST00000517230 109 ntBASIC0.32□□□□□ -2.36
GDF1P27539 MIR3668-201ENST00000582138 75 ntBASIC0.32□□□□□ -2.36
GDF1P27539 MIR6828-201ENST00000636181 60 ntBASIC0.32□□□□□ -2.36
GDF1P27539 SNORD115-19-201ENST00000363098 82 ntBASIC0.31□□□□□ -2.36
GDF1P27539 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
GDF1P27539 SNORD115-18-201ENST00000363293 82 ntBASIC0.31□□□□□ -2.36
GDF1P27539 RNA5SP325-201ENST00000363756 130 ntBASIC0.31□□□□□ -2.36
GDF1P27539 SNORD115-17-201ENST00000364612 82 ntBASIC0.31□□□□□ -2.36
GDF1P27539 SNORD115-35-201ENST00000365122 82 ntBASIC0.31□□□□□ -2.36
GDF1P27539 RNU6-187P-201ENST00000384139 106 ntBASIC0.31□□□□□ -2.36
GDF1P27539 RNU6-429P-201ENST00000384582 108 ntBASIC0.31□□□□□ -2.36
GDF1P27539 SNORD28-201ENST00000384706 75 ntBASIC0.31□□□□□ -2.36
GDF1P27539 Y_RNA.568-201ENST00000384742 113 ntBASIC0.31□□□□□ -2.36
GDF1P27539 RNU7-107P-201ENST00000459121 61 ntBASIC0.31□□□□□ -2.36
GDF1P27539 RNU6-469P-201ENST00000516253 101 ntBASIC0.31□□□□□ -2.36
GDF1P27539 RNU7-6P-201ENST00000516845 62 ntBASIC0.31□□□□□ -2.36
GDF1P27539 Y_RNA.56-201ENST00000362798 112 ntBASIC0.3□□□□□ -2.36
GDF1P27539 Y_RNA.127-201ENST00000363386 109 ntBASIC0.3□□□□□ -2.36
GDF1P27539 Y_RNA.198-201ENST00000364013 98 ntBASIC0.3□□□□□ -2.36
GDF1P27539 Y_RNA.247-201ENST00000364500 92 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIR34C-201ENST00000384831 77 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIRLET7F2-201ENST00000385277 83 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIR1263-201ENST00000408324 86 ntBASIC0.3□□□□□ -2.36
GDF1P27539 RNA5SP136-201ENST00000410906 107 ntBASIC0.3□□□□□ -2.36
GDF1P27539 SUMO1P3-201ENST00000439961 304 ntBASIC0.3□□□□□ -2.36
GDF1P27539 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.3□□□□□ -2.36
GDF1P27539 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
GDF1P27539 RNU6-135P-201ENST00000516769 101 ntBASIC0.3□□□□□ -2.36
GDF1P27539 RNA5SP268-201ENST00000516828 124 ntBASIC0.3□□□□□ -2.36
GDF1P27539 SCARNA16.5-201ENST00000517114 183 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIR1273G-201ENST00000577677 100 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIR3163-201ENST00000581592 73 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIR4639-201ENST00000584938 69 ntBASIC0.3□□□□□ -2.36
GDF1P27539 RNU1-29P-201ENST00000606574 126 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIR376B-201ENST00000614515 100 ntBASIC0.3□□□□□ -2.36
GDF1P27539 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.3□□□□□ -2.36
GDF1P27539 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.3□□□□□ -2.36
GDF1P27539 MIR101-2-201ENST00000362195 79 ntBASIC0.29□□□□□ -2.36
GDF1P27539 Y_RNA.98-201ENST00000363109 102 ntBASIC0.29□□□□□ -2.36
GDF1P27539 Y_RNA.328-201ENST00000365208 113 ntBASIC0.29□□□□□ -2.36
GDF1P27539 RNU6-209P-201ENST00000384118 107 ntBASIC0.29□□□□□ -2.36
GDF1P27539 AC244505.6-201ENST00000452829 130 ntBASIC0.29□□□□□ -2.36
GDF1P27539 RNU6-971P-201ENST00000516920 106 ntBASIC0.29□□□□□ -2.36
GDF1P27539 MIR3133-201ENST00000583157 78 ntBASIC0.29□□□□□ -2.36
GDF1P27539 MIR7107-201ENST00000611489 80 ntBASIC0.29□□□□□ -2.36
GDF1P27539 AC244669.1-204ENST00000621564 178 ntBASIC0.29□□□□□ -2.36
GDF1P27539 AP001362.1-201ENST00000625165 124 ntBASIC0.29□□□□□ -2.36
GDF1P27539 Y_RNA.218-201ENST00000364218 104 ntBASIC0.28□□□□□ -2.36
GDF1P27539 Y_RNA.344-201ENST00000365381 112 ntBASIC0.28□□□□□ -2.36
GDF1P27539 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
GDF1P27539 BX276092.1-201ENST00000427368 251 ntBASIC0.28□□□□□ -2.36
GDF1P27539 TRAJ51-201ENST00000504127 63 ntBASIC0.28□□□□□ -2.36
GDF1P27539 RNU6-1232P-201ENST00000516299 86 ntBASIC0.28□□□□□ -2.36
GDF1P27539 MIR4500-201ENST00000579472 76 ntBASIC0.28□□□□□ -2.36
GDF1P27539 MIR4752-201ENST00000579672 72 ntBASIC0.28□□□□□ -2.36
GDF1P27539 TUG1_4.1-201ENST00000619464 181 ntBASIC0.28□□□□□ -2.36
GDF1P27539 MIR6755-201ENST00000619993 66 ntBASIC0.28□□□□□ -2.36
GDF1P27539 Y_RNA.213-201ENST00000364178 111 ntBASIC0.27□□□□□ -2.37
GDF1P27539 SNORD58C-201ENST00000365223 64 ntBASIC0.27□□□□□ -2.37
GDF1P27539 Y_RNA.528-201ENST00000384575 108 ntBASIC0.27□□□□□ -2.37
GDF1P27539 SNORA40-201ENST00000388090 126 ntBASIC0.27□□□□□ -2.37
GDF1P27539 Y_RNA.586-201ENST00000391146 98 ntBASIC0.27□□□□□ -2.37
GDF1P27539 AC069271.1-201ENST00000445577 156 ntBASIC0.27□□□□□ -2.37
GDF1P27539 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
GDF1P27539 RNU6-1229P-201ENST00000364295 107 ntBASIC0.26□□□□□ -2.37
GDF1P27539 Y_RNA.343-201ENST00000365354 112 ntBASIC0.26□□□□□ -2.37
GDF1P27539 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
GDF1P27539 RNU7-106P-201ENST00000459514 67 ntBASIC0.26□□□□□ -2.37
GDF1P27539 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
GDF1P27539 RNU6-772P-201ENST00000516042 105 ntBASIC0.26□□□□□ -2.37
GDF1P27539 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
GDF1P27539 RNU6-521P-201ENST00000516663 105 ntBASIC0.26□□□□□ -2.37
GDF1P27539 RNU6-1006P-201ENST00000516998 103 ntBASIC0.26□□□□□ -2.37
GDF1P27539 RNU7-161P-201ENST00000517289 62 ntBASIC0.26□□□□□ -2.37
GDF1P27539 MIR548H5-201ENST00000580314 60 ntBASIC0.26□□□□□ -2.37
GDF1P27539 AL035470.1-201ENST00000622571 220 ntBASIC0.26□□□□□ -2.37
GDF1P27539 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.26□□□□□ -2.37
GDF1P27539 SNORD115-24-201ENST00000363528 82 ntBASIC0.25□□□□□ -2.37
GDF1P27539 RNU6-865P-201ENST00000364772 107 ntBASIC0.25□□□□□ -2.37
GDF1P27539 Y_RNA.549-201ENST00000384657 102 ntBASIC0.25□□□□□ -2.37
GDF1P27539 MIR548D2-201ENST00000384955 97 ntBASIC0.25□□□□□ -2.37
GDF1P27539 RNA5SP227-201ENST00000516184 113 ntBASIC0.25□□□□□ -2.37
GDF1P27539 AC138869.1-201ENST00000568623 124 ntBASIC0.25□□□□□ -2.37
GDF1P27539 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
GDF1P27539 AC025166.1-201ENST00000612411 163 ntBASIC0.25□□□□□ -2.37
GDF1P27539 AC091304.10-201ENST00000641554 121 ntBASIC0.25□□□□□ -2.37
GDF1P27539 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
GDF1P27539 Y_RNA.49-201ENST00000362714 112 ntBASIC0.24□□□□□ -2.37
GDF1P27539 Y_RNA.360-201ENST00000365512 102 ntBASIC0.24□□□□□ -2.37
GDF1P27539 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
GDF1P27539 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.24□□□□□ -2.37
GDF1P27539 RNA5SP330-201ENST00000517096 96 ntBASIC0.24□□□□□ -2.37
GDF1P27539 MTND5P18-201ENST00000445624 1801 ntBASIC0.24□□□□□ -2.37
GDF1P27539 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
GDF1P27539 Y_RNA.258-201ENST00000364613 105 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 223.4 ms