Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 Y_RNA.567-201ENST00000384736 106 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
COL5A3P25940 SNORA75.5-201ENST00000391291 81 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 MIR1270-201ENST00000459320 83 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 AC107027.2-201ENST00000512197 115 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 RN7SKP19-201ENST00000516016 252 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 RNU6-1194P-201ENST00000516208 104 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 RNU6-765P-201ENST00000516916 99 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 SNORA25.18-201ENST00000607153 114 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 RNU6-1104P-201ENST00000384723 104 ntBASIC0.11□□□□□ -2.39
COL5A3P25940 MT-TQ-201ENST00000387372 72 ntBASIC0.11□□□□□ -2.39
COL5A3P25940 MIR513C-201ENST00000401352 84 ntBASIC0.11□□□□□ -2.39
COL5A3P25940 RNU7-164P-201ENST00000459221 62 ntBASIC0.11□□□□□ -2.39
COL5A3P25940 RNU7-120P-201ENST00000459334 63 ntBASIC0.11□□□□□ -2.39
COL5A3P25940 MIR8066-201ENST00000617280 78 ntBASIC0.11□□□□□ -2.39
COL5A3P25940 AC078938.1-201ENST00000620993 318 ntBASIC0.11□□□□□ -2.39
COL5A3P25940 Y_RNA.119-201ENST00000363301 96 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 SNORD114-3-201ENST00000364969 75 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 Y_RNA.497-201ENST00000384447 98 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 MIRLET7F2-201ENST00000385277 83 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 MIR1207-201ENST00000408249 87 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 RNU4-69P-201ENST00000410677 143 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 RNU7-48P-201ENST00000458875 63 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 AC074198.2-201ENST00000508153 258 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 Y_RNA.686-201ENST00000516548 134 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 Y_RNA.692-201ENST00000516627 105 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 AC138869.1-201ENST00000568623 124 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 AC108081.1-201ENST00000604358 221 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 RNU6-682P-201ENST00000363843 106 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 RNU6-151P-201ENST00000364158 107 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 Y_RNA.257-201ENST00000364596 102 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 RNU6-726P-201ENST00000364680 107 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 RNY1P2-201ENST00000364820 117 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 SNORD49B-201ENST00000365172 72 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 Y_RNA.785-201ENST00000384290 109 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 MIR206-201ENST00000384872 86 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 PCNPP3-201ENST00000393579 471 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 MIR3658-201ENST00000636291 56 ntBASIC0.1□□□□□ -2.39
COL5A3P25940 Y_RNA.56-201ENST00000362798 112 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 Y_RNA.144-201ENST00000363521 113 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-1099P-201ENST00000363533 107 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 Y_RNA.441-201ENST00000384123 112 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 SNORD37.2-201ENST00000391075 66 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-394P-201ENST00000410735 107 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 SNORD71-201ENST00000411292 86 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 TRAJ51-201ENST00000504127 63 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RN7SKP12-201ENST00000516275 143 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 Y_RNA.690-201ENST00000516603 95 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNU6-135P-201ENST00000516769 101 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNA5SP268-201ENST00000516828 124 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 AC141557.1-201ENST00000540982 400 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.09□□□□□ -2.4
COL5A3P25940 U6.109-201ENST00000636749 87 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 AC091304.10-201ENST00000641554 121 ntBASIC0.09□□□□□ -2.4
COL5A3P25940 Y_RNA.120-201ENST00000363304 110 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 Y_RNA.240-201ENST00000364469 95 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 RNU6-200P-201ENST00000364743 107 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 RNU6-46P-201ENST00000383860 107 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 Y_RNA.495-201ENST00000384435 112 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 MIR214-201ENST00000385214 110 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 MIR4639-201ENST00000584938 69 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 AL359881.1-201ENST00000602916 267 ntBASIC0.08□□□□□ -2.4
COL5A3P25940 MIRLET7D-201ENST00000362263 87 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 Y_RNA.298-201ENST00000364960 107 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 RNU6-449P-201ENST00000383914 107 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 MT-TI-201ENST00000387365 69 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 MIR759-201ENST00000390224 91 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 RNU6-138P-201ENST00000515952 107 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 Y_RNA.29-201ENST00000362570 113 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 SNORA63.5-201ENST00000363548 123 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 SNORA32-201ENST00000384072 121 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 Y_RNA.568-201ENST00000384742 113 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 Y_RNA.651-201ENST00000459380 103 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 RNU7-2P-201ENST00000516096 62 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 MIR548H5-201ENST00000580314 60 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 MIR548AE2-201ENST00000583456 67 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 Y_RNA.773-201ENST00000607168 90 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 AL162376.1-201ENST00000624117 175 ntBASIC0.07□□□□□ -2.4
COL5A3P25940 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.07□□□□□ -2.4
COL5A3P25940 Y_RNA.328-201ENST00000365208 113 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 Y_RNA.400-201ENST00000383963 111 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 MTATP6P21-201ENST00000440681 189 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 RNU5E-3P-201ENST00000515913 68 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms