Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.23□□□□□ -2.37
RNF41Q9H4P4 RNU4-58P-201ENST00000363192 141 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 Y_RNA.785-201ENST00000384290 109 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 AC074198.2-201ENST00000508153 258 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 RNU6-135P-201ENST00000516769 101 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 SNORA81.3-201ENST00000517283 198 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 MIR4639-201ENST00000584938 69 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 AC004792.1-201ENST00000614523 137 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 U6.109-201ENST00000636749 87 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
RNF41Q9H4P4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.21□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.29-201ENST00000362570 113 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 SNORA63.5-201ENST00000363548 123 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.272-201ENST00000364696 102 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 RNU2-59P-201ENST00000410482 191 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 RNU4-69P-201ENST00000410677 143 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 SUMO1P3-201ENST00000439961 304 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 AC069271.1-201ENST00000445577 156 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.662-201ENST00000516028 97 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 AC108081.1-201ENST00000604358 221 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 AC105081.1-201ENST00000617727 106 ntBASIC0.21□□□□□ -2.38
RNF41Q9H4P4 RNY1P2-201ENST00000364820 117 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 SNORD37.2-201ENST00000391075 66 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 AC112693.2-201ENST00000556538 232 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 MIR6755-201ENST00000619993 66 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 AC244669.1-204ENST00000621564 178 ntBASIC0.2□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.56-201ENST00000362798 112 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.257-201ENST00000364596 102 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 SNORD18B-201ENST00000365659 72 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.580-201ENST00000391004 95 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 RNU6-394P-201ENST00000410735 107 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 DEFB131E-201ENST00000532329 154 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 MIR3121-201ENST00000579680 77 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 AC098479.1-201ENST00000609225 154 ntBASIC0.19□□□□□ -2.38
RNF41Q9H4P4 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 snosnR66.1-201ENST00000391095 99 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 AC244505.6-201ENST00000452829 130 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 AC091304.10-201ENST00000641554 121 ntBASIC0.18□□□□□ -2.38
RNF41Q9H4P4 RNU4-11P-201ENST00000365287 132 ntBASIC0.17□□□□□ -2.38
RNF41Q9H4P4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.17□□□□□ -2.38
RNF41Q9H4P4 RNU6-429P-201ENST00000384582 108 ntBASIC0.17□□□□□ -2.38
RNF41Q9H4P4 MIR206-201ENST00000384872 86 ntBASIC0.17□□□□□ -2.38
RNF41Q9H4P4 MIR193B-201ENST00000384907 83 ntBASIC0.17□□□□□ -2.38
RNF41Q9H4P4 AL137067.1-201ENST00000615933 120 ntBASIC0.17□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.16□□□□□ -2.38
RNF41Q9H4P4 RNU6-1130P-201ENST00000365434 107 ntBASIC0.16□□□□□ -2.38
RNF41Q9H4P4 RNA5SP227-201ENST00000516184 113 ntBASIC0.16□□□□□ -2.38
RNF41Q9H4P4 IGKV1-22-201ENST00000524313 326 ntBASIC0.16□□□□□ -2.38
RNF41Q9H4P4 RNU1-29P-201ENST00000606574 126 ntBASIC0.16□□□□□ -2.38
RNF41Q9H4P4 Y_RNA.778-201ENST00000620203 90 ntBASIC0.16□□□□□ -2.38
RNF41Q9H4P4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.15□□□□□ -2.39
RNF41Q9H4P4 RNU6-187P-201ENST00000384139 106 ntBASIC0.15□□□□□ -2.39
RNF41Q9H4P4 MT-TI-201ENST00000387365 69 ntBASIC0.15□□□□□ -2.39
RNF41Q9H4P4 RNU6-460P-201ENST00000391158 108 ntBASIC0.15□□□□□ -2.39
RNF41Q9H4P4 RNY4P20-201ENST00000516678 93 ntBASIC0.15□□□□□ -2.39
RNF41Q9H4P4 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
RNF41Q9H4P4 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
RNF41Q9H4P4 RNU6-151P-201ENST00000364158 107 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 PCNPP3-201ENST00000393579 471 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 AC073261.1-201ENST00000429409 121 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 AC108059.2-201ENST00000434626 151 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 RNU6-848P-201ENST00000515948 107 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 RNU6-617P-201ENST00000516147 107 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 RNU6-473P-201ENST00000516164 107 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 MIR4514-201ENST00000581410 57 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 AC023932.2-201ENST00000603176 175 ntBASIC0.14□□□□□ -2.39
RNF41Q9H4P4 MIR101-2-201ENST00000362195 79 ntBASIC0.13□□□□□ -2.39
RNF41Q9H4P4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.13□□□□□ -2.39
RNF41Q9H4P4 RNU6-726P-201ENST00000364680 107 ntBASIC0.13□□□□□ -2.39
RNF41Q9H4P4 RNU7-48P-201ENST00000458875 63 ntBASIC0.13□□□□□ -2.39
RNF41Q9H4P4 SNORA62.5-201ENST00000516634 120 ntBASIC0.13□□□□□ -2.39
RNF41Q9H4P4 RNU7-161P-201ENST00000517289 62 ntBASIC0.13□□□□□ -2.39
RNF41Q9H4P4 AC087741.2-201ENST00000619415 172 ntBASIC0.13□□□□□ -2.39
RNF41Q9H4P4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 SNORD115-24-201ENST00000363528 82 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 RNU6-449P-201ENST00000383914 107 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 RNU6-616P-201ENST00000384353 107 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 RNU7-2P-201ENST00000516096 62 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 AC138869.1-201ENST00000568623 124 ntBASIC0.12□□□□□ -2.39
RNF41Q9H4P4 MIR1273G-201ENST00000577677 100 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 235.3 ms