Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC015540.1-201ENST00000615828 501 ntBASIC-1.86□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 AC107399.1-201ENST00000451226 265 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 RNU2-4P-201ENST00000606190 192 ntBASIC-1.87□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.88□□□□□ -2.71
VPS25Q9BRG1 RNU6-102P-201ENST00000384485 104 ntBASIC-1.88□□□□□ -2.71
VPS25Q9BRG1 SEPT14P8-201ENST00000508026 178 ntBASIC-1.88□□□□□ -2.71
VPS25Q9BRG1 SNORD113-5-201ENST00000607261 78 ntBASIC-1.88□□□□□ -2.71
VPS25Q9BRG1 MIR409-201ENST00000362237 79 ntBASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 RNU6-662P-201ENST00000384253 104 ntBASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 RNU6-561P-201ENST00000516222 102 ntBASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 RNU6-453P-201ENST00000516819 85 ntBASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.89□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 RNU6-890P-201ENST00000384121 107 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 AL606845.1-201ENST00000404881 255 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 RNU4-14P-201ENST00000410858 122 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 SNORD42B-201ENST00000458893 67 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 RNU7-2P-201ENST00000516096 62 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 RNU6-570P-201ENST00000517051 105 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 MIR4770-201ENST00000579149 58 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 VN1R91P-201ENST00000594377 169 ntBASIC-1.9□□□□□ -2.71
VPS25Q9BRG1 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.91□□□□□ -2.72
VPS25Q9BRG1 RNU6-957P-201ENST00000363652 99 ntBASIC-1.91□□□□□ -2.72
VPS25Q9BRG1 RNU6-472P-201ENST00000384299 107 ntBASIC-1.91□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.91□□□□□ -2.72
VPS25Q9BRG1 MIR4464-201ENST00000580818 92 ntBASIC-1.91□□□□□ -2.72
VPS25Q9BRG1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 SNORD27-201ENST00000363981 72 ntBASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 RNU6-310P-201ENST00000384655 107 ntBASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 MIR34C-201ENST00000384831 77 ntBASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 MIR889-201ENST00000401280 79 ntBASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.92□□□□□ -2.72
VPS25Q9BRG1 RNU6-208P-201ENST00000362431 107 ntBASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 RNU6-746P-201ENST00000384112 109 ntBASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 RNU4-69P-201ENST00000410677 143 ntBASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 snoU18.1-201ENST00000629629 71 ntBASIC-1.93□□□□□ -2.72
VPS25Q9BRG1 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.94□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.94□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.94□□□□□ -2.72
VPS25Q9BRG1 RNU6-130P-201ENST00000411112 103 ntBASIC-1.94□□□□□ -2.72
VPS25Q9BRG1 HSPE1P25-201ENST00000455484 251 ntBASIC-1.94□□□□□ -2.72
VPS25Q9BRG1 MIR5688-201ENST00000580619 83 ntBASIC-1.94□□□□□ -2.72
VPS25Q9BRG1 AC090582.1-201ENST00000636321 199 ntBASIC-1.94□□□□□ -2.72
VPS25Q9BRG1 SNORD36A-201ENST00000362874 73 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 SNORD113-8-201ENST00000363497 74 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 MIR527-201ENST00000385244 85 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 RNU6-243P-201ENST00000391140 107 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 AL731563.1-201ENST00000442202 214 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 AC084782.3-201ENST00000612282 578 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 AC048344.4-201ENST00000619744 527 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 AC022079.1-201ENST00000621546 602 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 MIR6818-201ENST00000621576 65 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 MIR4272-201ENST00000635924 64 ntBASIC-1.95□□□□□ -2.72
VPS25Q9BRG1 UBE2WP1-201ENST00000362030 340 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 RNU6-616P-201ENST00000384353 107 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 MTND4P17-201ENST00000470444 350 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 RNU6-559P-201ENST00000516151 98 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 MIR4696-201ENST00000581431 70 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 MIR6129-201ENST00000616087 109 ntBASIC-1.96□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 RNU6-690P-201ENST00000365242 106 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 SNORD101-201ENST00000384027 73 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 AC093424.1-201ENST00000604999 338 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 MIR6888-201ENST00000621977 67 ntBASIC-1.97□□□□□ -2.72
VPS25Q9BRG1 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms