Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
RNFT1Q5M7Z0 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
RNFT1Q5M7Z0 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.37□□□□□ -2.03
RNFT1Q5M7Z0 U6.100-201ENST00000636230 99 ntBASIC2.37□□□□□ -2.03
RNFT1Q5M7Z0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RNFT1Q5M7Z0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.36□□□□□ -2.03
RNFT1Q5M7Z0 AL109933.3-201ENST00000619095 188 ntBASIC2.36□□□□□ -2.03
RNFT1Q5M7Z0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RNFT1Q5M7Z0 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
RNFT1Q5M7Z0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RNFT1Q5M7Z0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNFT1Q5M7Z0 MIR101-2-201ENST00000362195 79 ntBASIC2.35□□□□□ -2.03
RNFT1Q5M7Z0 RNA5SP508-201ENST00000411327 119 ntBASIC2.35□□□□□ -2.03
RNFT1Q5M7Z0 AC008413.1-201ENST00000511864 177 ntBASIC2.35□□□□□ -2.03
RNFT1Q5M7Z0 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
RNFT1Q5M7Z0 Y_RNA.722-201ENST00000517279 114 ntBASIC2.35□□□□□ -2.03
RNFT1Q5M7Z0 DEFB122-202ENST00000569013 197 ntBASIC2.35□□□□□ -2.03
RNFT1Q5M7Z0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 MIR377-201ENST00000362145 69 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 Y_RNA.56-201ENST00000362798 112 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 SNORA25.3-201ENST00000363205 127 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 RNU6-274P-201ENST00000459566 107 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 MIR514B-201ENST00000516774 80 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 MIR3192-201ENST00000584920 77 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 U1.36-201ENST00000620684 176 ntBASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.34□□□□□ -2.03
RNFT1Q5M7Z0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
RNFT1Q5M7Z0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 MIR194-1-201ENST00000384892 85 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-808P-201ENST00000391233 108 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 SNORD93-201ENST00000408813 74 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 AC004965.1-201ENST00000413033 213 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-542P-201ENST00000516405 103 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 uc_338.6-201ENST00000613544 171 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 AC010297.1-201ENST00000623948 149 ntBASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNFT1Q5M7Z0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 SNORA3A-201ENST00000364113 130 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-654P-201ENST00000364373 107 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-203P-201ENST00000384038 104 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 MIR451A-201ENST00000385059 72 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 MIR27B-201ENST00000385129 97 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-1177P-201ENST00000391058 104 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RNA5SP100-201ENST00000410903 110 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RNA5SP59-201ENST00000410922 110 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 AC097635.1-201ENST00000450678 155 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 MIR18B-201ENST00000454574 71 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RN7SL274P-201ENST00000492268 272 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 MIR3124-201ENST00000582636 67 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-1079P-201ENST00000362861 110 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 RNU1-36P-201ENST00000365130 165 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 SNORD41-201ENST00000386967 70 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 AC244098.3-201ENST00000424803 96 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 MIR3670-2-201ENST00000582974 65 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 MIR3670-1-201ENST00000584160 65 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 MIR3670-3-201ENST00000584855 65 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 MIR3670-4-201ENST00000612260 65 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 AC092634.7-201ENST00000621022 103 ntBASIC2.31□□□□□ -2.04
RNFT1Q5M7Z0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-940P-201ENST00000363433 104 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 SNORA16B-201ENST00000364674 135 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 U3.27-201ENST00000391237 200 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 RNU1-41P-201ENST00000516161 162 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 RNU1-48P-201ENST00000516400 162 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 SNORD53-201ENST00000579969 78 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 AC013244.2-201ENST00000603396 103 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 SNRPGP19-201ENST00000603826 189 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 AL049779.4-201ENST00000604500 156 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 MIR4773-1-201ENST00000637203 78 ntBASIC2.3□□□□□ -2.04
RNFT1Q5M7Z0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-403P-201ENST00000363163 104 ntBASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 Y_RNA.375-201ENST00000365625 101 ntBASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 MTND4LP1-201ENST00000446263 157 ntBASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-1265P-201ENST00000516342 103 ntBASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 MIR466-201ENST00000580653 84 ntBASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 MIR3920-201ENST00000581751 86 ntBASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 AC104984.5-201ENST00000586878 94 ntBASIC2.29□□□□□ -2.04
RNFT1Q5M7Z0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 SNORA25.5-201ENST00000363782 126 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-580P-201ENST00000365159 107 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-382P-201ENST00000365181 106 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNA5SP210-201ENST00000391034 120 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 SNORA3.2-201ENST00000408221 125 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 MIR1261-201ENST00000408659 82 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-1054P-201ENST00000411293 104 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-1052P-201ENST00000411398 104 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms