Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU7-164P-201ENST00000459221 62 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 RNU7-137P-201ENST00000516788 62 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.13□□□□□ -2.39
GABPAQ06546 Y_RNA.49-201ENST00000362714 112 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 SNORA63.5-201ENST00000363548 123 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
GABPAQ06546 AC138749.4-201ENST00000563970 127 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 MIR3646-201ENST00000578301 84 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 MIR4719-201ENST00000585233 84 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 AL359881.1-201ENST00000602916 267 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
GABPAQ06546 SNORD114-10-201ENST00000363409 72 ntBASIC0.11□□□□□ -2.39
GABPAQ06546 Y_RNA.366-201ENST00000365540 102 ntBASIC0.11□□□□□ -2.39
GABPAQ06546 Y_RNA.476-201ENST00000384347 108 ntBASIC0.11□□□□□ -2.39
GABPAQ06546 RNU6-239P-201ENST00000390990 99 ntBASIC0.11□□□□□ -2.39
GABPAQ06546 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
GABPAQ06546 Y_RNA.644-201ENST00000459006 113 ntBASIC0.11□□□□□ -2.39
GABPAQ06546 Y_RNA.674-201ENST00000516362 113 ntBASIC0.11□□□□□ -2.39
GABPAQ06546 Y_RNA.56-201ENST00000362798 112 ntBASIC0.1□□□□□ -2.39
GABPAQ06546 Y_RNA.274-201ENST00000364714 101 ntBASIC0.1□□□□□ -2.39
GABPAQ06546 Y_RNA.297-201ENST00000364950 91 ntBASIC0.1□□□□□ -2.39
GABPAQ06546 RNU6-187P-201ENST00000384139 106 ntBASIC0.1□□□□□ -2.39
GABPAQ06546 TUG1_4.1-201ENST00000619464 181 ntBASIC0.1□□□□□ -2.39
GABPAQ06546 AC067863.3-201ENST00000624172 122 ntBASIC0.1□□□□□ -2.39
GABPAQ06546 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
GABPAQ06546 AC099654.10-201ENST00000640395 161 ntBASIC0.1□□□□□ -2.39
GABPAQ06546 SNORA9.1-201ENST00000362412 131 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 Y_RNA.144-201ENST00000363521 113 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 RNU4-69P-201ENST00000410677 143 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 RNU5E-3P-201ENST00000515913 68 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 RNU2-60P-201ENST00000517290 128 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 AC072026.1-201ENST00000605023 201 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 AC098479.1-201ENST00000609225 154 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 MIR6755-201ENST00000619993 66 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 MIR3658-201ENST00000636291 56 ntBASIC0.09□□□□□ -2.4
GABPAQ06546 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.08□□□□□ -2.4
GABPAQ06546 RNU6-508P-201ENST00000363231 103 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 SNORD115-24-201ENST00000363528 82 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 RNU4-84P-201ENST00000364200 139 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 Y_RNA.299-201ENST00000364973 94 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 Y_RNA.584-201ENST00000391090 114 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 RNU7-123P-201ENST00000515911 60 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 AP002392.1-201ENST00000537692 208 ntBASIC0.08□□□□□ -2.4
GABPAQ06546 Y_RNA.30-201ENST00000362572 97 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 RNU6-309P-201ENST00000364573 106 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 RNU6-1318P-201ENST00000365389 103 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 PCNPP3-201ENST00000393579 471 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 Y_RNA.690-201ENST00000516603 95 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 MIR5190-201ENST00000581537 80 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 DNAJC19P2-201ENST00000593340 302 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 AL353621.2-201ENST00000605340 133 ntBASIC0.07□□□□□ -2.4
GABPAQ06546 Y_RNA.85-201ENST00000363014 111 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 RNY1P11-201ENST00000363759 113 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 RNY1P2-201ENST00000364820 117 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 RNU6-1126P-201ENST00000384002 107 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 RNU6-429P-201ENST00000384582 108 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 MIR548L-201ENST00000408303 86 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 RNU7-121P-201ENST00000516604 62 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.06□□□□□ -2.4
GABPAQ06546 MIR4500-201ENST00000579472 76 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 MIR4752-201ENST00000579672 72 ntBASIC0.06□□□□□ -2.4
GABPAQ06546 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 Y_RNA.188-201ENST00000363952 111 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 Y_RNA.298-201ENST00000364960 107 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 MIR760-201ENST00000390220 80 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 SNORD77B-201ENST00000391112 67 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 MIR1270-201ENST00000459320 83 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 Y_RNA.651-201ENST00000459380 103 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 RNU6-1271P-201ENST00000517049 105 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 AC138869.1-201ENST00000568623 124 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 MIR548H5-201ENST00000580314 60 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 AC141273.2-201ENST00000618989 130 ntBASIC0.05□□□□□ -2.4
GABPAQ06546 RNA5SP257-201ENST00000363023 116 ntBASIC0.04□□□□□ -2.4
GABPAQ06546 RNU6-1321P-201ENST00000390905 107 ntBASIC0.04□□□□□ -2.4
GABPAQ06546 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
GABPAQ06546 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 AC244505.6-201ENST00000452829 130 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 RNU6-617P-201ENST00000516147 107 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 RNU6-473P-201ENST00000516164 107 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 RNU6-1049P-201ENST00000516414 107 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 Y_RNA.686-201ENST00000516548 134 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 RNU6-861P-201ENST00000516745 106 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 RNU7-10P-201ENST00000607194 63 ntBASIC0.03□□□□□ -2.4
GABPAQ06546 Y_RNA.98-201ENST00000363109 102 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 RNU6-379P-201ENST00000363813 104 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 Y_RNA.240-201ENST00000364469 95 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 Y_RNA.448-201ENST00000384185 108 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 MIR635-201ENST00000384830 98 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 AL603914.1-201ENST00000401964 204 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 RNU7-48P-201ENST00000458875 63 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 Y_RNA.662-201ENST00000516028 97 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 AL137067.1-201ENST00000615933 120 ntBASIC0.02□□□□□ -2.41
GABPAQ06546 RNU6-726P-201ENST00000364680 107 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 270.9 ms