Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 Y_RNA.549-201ENST00000384657 102 ntBASIC0.3□□□□□ -2.36
LIMK1P53667 Y_RNA.552-201ENST00000384665 112 ntBASIC0.3□□□□□ -2.36
LIMK1P53667 RNA5SP236-201ENST00000516169 116 ntBASIC0.3□□□□□ -2.36
LIMK1P53667 MIR4636-201ENST00000582271 80 ntBASIC0.3□□□□□ -2.36
LIMK1P53667 SNORD115-2-201ENST00000362842 82 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 SNORD115-20-201ENST00000365099 82 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 RNU6-291P-201ENST00000384720 107 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 Y_RNA.584-201ENST00000391090 114 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 AC096949.1-201ENST00000412047 152 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 RNU7-164P-201ENST00000459221 62 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 RNU5E-3P-201ENST00000515913 68 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 RNU6-531P-201ENST00000516694 104 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 RNU6-135P-201ENST00000516769 101 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 RNA5SP268-201ENST00000516828 124 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 U6.109-201ENST00000636749 87 ntBASIC0.29□□□□□ -2.36
LIMK1P53667 RNU6-1099P-201ENST00000363533 107 ntBASIC0.28□□□□□ -2.36
LIMK1P53667 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
LIMK1P53667 RNU6-1318P-201ENST00000365389 103 ntBASIC0.28□□□□□ -2.36
LIMK1P53667 SNRPGP12-201ENST00000449481 213 ntBASIC0.28□□□□□ -2.36
LIMK1P53667 MIR548AE2-201ENST00000583456 67 ntBASIC0.28□□□□□ -2.36
LIMK1P53667 AC078938.1-201ENST00000620993 318 ntBASIC0.28□□□□□ -2.36
LIMK1P53667 Y_RNA.170-201ENST00000363746 110 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 RNU6-379P-201ENST00000363813 104 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 RNU4-84P-201ENST00000364200 139 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 Y_RNA.662-201ENST00000516028 97 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 RNU2-35P-201ENST00000516446 142 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 SNORD67.1-201ENST00000516618 108 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 RNU6-388P-201ENST00000517012 105 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 RNU6-389P-201ENST00000517048 105 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 MIR5589-201ENST00000579442 60 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 DNAJC19P2-201ENST00000593340 302 ntBASIC0.27□□□□□ -2.37
LIMK1P53667 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.27□□□□□ -2.37
LIMK1P53667 SNORA36.1-201ENST00000363424 132 ntBASIC0.26□□□□□ -2.37
LIMK1P53667 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.26□□□□□ -2.37
LIMK1P53667 AC105081.1-201ENST00000617727 106 ntBASIC0.26□□□□□ -2.37
LIMK1P53667 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
LIMK1P53667 MIRLET7F2-201ENST00000385277 83 ntBASIC0.25□□□□□ -2.37
LIMK1P53667 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
LIMK1P53667 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
LIMK1P53667 Y_RNA.690-201ENST00000516603 95 ntBASIC0.25□□□□□ -2.37
LIMK1P53667 RNU6-861P-201ENST00000516745 106 ntBASIC0.25□□□□□ -2.37
LIMK1P53667 MIR3658-201ENST00000636291 56 ntBASIC0.25□□□□□ -2.37
LIMK1P53667 Y_RNA.119-201ENST00000363301 96 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 SNORD114-10-201ENST00000363409 72 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 Y_RNA.299-201ENST00000364973 94 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 RNU2-59P-201ENST00000410482 191 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 RNU7-137P-201ENST00000516788 62 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.24□□□□□ -2.37
LIMK1P53667 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
LIMK1P53667 RNU6-200P-201ENST00000364743 107 ntBASIC0.23□□□□□ -2.37
LIMK1P53667 RNU4-69P-201ENST00000410677 143 ntBASIC0.23□□□□□ -2.37
LIMK1P53667 Z95118.1-201ENST00000421372 247 ntBASIC0.23□□□□□ -2.37
LIMK1P53667 RNU6-863P-201ENST00000515989 104 ntBASIC0.23□□□□□ -2.37
LIMK1P53667 RNU7-121P-201ENST00000516604 62 ntBASIC0.23□□□□□ -2.37
LIMK1P53667 AC091304.10-201ENST00000641554 121 ntBASIC0.23□□□□□ -2.37
LIMK1P53667 Y_RNA.240-201ENST00000364469 95 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 RNU6-309P-201ENST00000364573 106 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 SNORD77B-201ENST00000391112 67 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 RNU7-123P-201ENST00000515911 60 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 SCARNA16.5-201ENST00000517114 183 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 AC138749.4-201ENST00000563970 127 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 MIR4639-201ENST00000584938 69 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 AC244669.1-204ENST00000621564 178 ntBASIC0.22□□□□□ -2.37
LIMK1P53667 Y_RNA.29-201ENST00000362570 113 ntBASIC0.21□□□□□ -2.38
LIMK1P53667 SNORD28-201ENST00000384706 75 ntBASIC0.21□□□□□ -2.38
LIMK1P53667 AC069271.1-201ENST00000445577 156 ntBASIC0.21□□□□□ -2.38
LIMK1P53667 RNU6-138P-201ENST00000515952 107 ntBASIC0.21□□□□□ -2.38
LIMK1P53667 RNU2-60P-201ENST00000517290 128 ntBASIC0.21□□□□□ -2.38
LIMK1P53667 AC112693.2-201ENST00000556538 232 ntBASIC0.21□□□□□ -2.38
LIMK1P53667 AC098479.1-201ENST00000609225 154 ntBASIC0.21□□□□□ -2.38
LIMK1P53667 Y_RNA.49-201ENST00000362714 112 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 RNU6-508P-201ENST00000363231 103 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 RNA5SP245-201ENST00000364239 121 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 Y_RNA.298-201ENST00000364960 107 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 SNORA2A-201ENST00000383885 135 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 RNA5SP25-201ENST00000410815 110 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 snoU13.19-201ENST00000459148 104 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 RNA5SP47-201ENST00000517230 109 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 AL359881.1-201ENST00000602916 267 ntBASIC0.2□□□□□ -2.38
LIMK1P53667 SNORA63.5-201ENST00000363548 123 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 Y_RNA.366-201ENST00000365540 102 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 Y_RNA.423-201ENST00000384057 113 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 MT-TG-201ENST00000387429 68 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
LIMK1P53667 AL603914.1-201ENST00000401964 204 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 MIR548L-201ENST00000408303 86 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 RNU7-120P-201ENST00000459334 63 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 Y_RNA.686-201ENST00000516548 134 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 MIR7107-201ENST00000611489 80 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 AL137067.1-201ENST00000615933 120 ntBASIC0.19□□□□□ -2.38
LIMK1P53667 Y_RNA.56-201ENST00000362798 112 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 268.6 ms