Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-845P-201ENST00000362578 103 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU6-931P-201ENST00000363850 107 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU4-68P-201ENST00000364314 141 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU6-38P-201ENST00000384085 107 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 MIR487B-201ENST00000385021 84 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 MIR451A-201ENST00000385059 72 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 MTCO2P19-201ENST00000427513 598 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU6-408P-201ENST00000515910 100 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU2-35P-201ENST00000516446 142 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 AC144568.1-201ENST00000520139 137 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 MIR4490-201ENST00000582647 84 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 RNU6-89P-201ENST00000606519 100 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 MIR376A2-201ENST00000636782 80 ntBASIC-1.43□□□□□ -2.64
SPTA1P02549 FGF7P2-201ENST00000332473 296 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 RNU6-495P-201ENST00000362995 107 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 RNU6-282P-201ENST00000365357 103 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 SNORA19.1-201ENST00000410656 129 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 PMCHL1-202ENST00000423102 261 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 AL009048.1-201ENST00000450437 298 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 AC120024.2-201ENST00000576526 175 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 MIR5692C2-201ENST00000577959 77 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 AP000720.1-201ENST00000625091 483 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 RNU6-924P-201ENST00000362926 108 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 RNU6-935P-201ENST00000410371 100 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 AC090616.4-201ENST00000448026 115 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 RNU7-106P-201ENST00000459514 67 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 RNA5SP153-201ENST00000516498 76 ntBASIC-1.44□□□□□ -2.64
SPTA1P02549 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
SPTA1P02549 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.45□□□□□ -2.64
SPTA1P02549 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.45□□□□□ -2.64
SPTA1P02549 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.45□□□□□ -2.64
SPTA1P02549 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.45□□□□□ -2.64
SPTA1P02549 RNU6-728P-201ENST00000365375 104 ntBASIC-1.45□□□□□ -2.64
SPTA1P02549 RNU6-144P-201ENST00000383951 107 ntBASIC-1.45□□□□□ -2.64
SPTA1P02549 RNU6-648P-201ENST00000410190 107 ntBASIC-1.45□□□□□ -2.64
SPTA1P02549 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.45□□□□□ -2.64
SPTA1P02549 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.45□□□□□ -2.64
SPTA1P02549 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 SNORD63-201ENST00000384262 68 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 RNU6-472P-201ENST00000384299 107 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 SNORA69.1-201ENST00000390904 137 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 AL035461.1-201ENST00000421490 332 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.46□□□□□ -2.64
SPTA1P02549 RNU7-24P-201ENST00000458867 62 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 RNU7-63P-201ENST00000459054 62 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 RNU7-2P-201ENST00000516096 62 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 MIR4659A-201ENST00000580269 81 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 MIR6128-201ENST00000615528 109 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 MIR548A1-201ENST00000385041 97 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.46□□□□□ -2.64
SPTA1P02549 MRPS36P3-201ENST00000519284 130 ntBASIC-1.46□□□□□ -2.64
SPTA1P02549 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
SPTA1P02549 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.46□□□□□ -2.64
SPTA1P02549 RNU6-774P-201ENST00000363238 107 ntBASIC-1.47□□□□□ -2.64
SPTA1P02549 MIR519A2-201ENST00000384990 87 ntBASIC-1.47□□□□□ -2.64
SPTA1P02549 MIR181A1-201ENST00000385026 110 ntBASIC-1.47□□□□□ -2.64
SPTA1P02549 AC024067.1-201ENST00000426199 223 ntBASIC-1.47□□□□□ -2.64
SPTA1P02549 AL512360.1-201ENST00000555346 234 ntBASIC-1.47□□□□□ -2.64
SPTA1P02549 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 RNY3P11-201ENST00000364153 102 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 RNU6-308P-201ENST00000390957 107 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.47□□□□□ -2.65
SPTA1P02549 RNU6-273P-201ENST00000516937 96 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 MIR4696-201ENST00000581431 70 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 AC007485.1-201ENST00000616755 206 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 PISRT1.1-201ENST00000616930 107 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.47□□□□□ -2.65
SPTA1P02549 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 RNU6-260P-201ENST00000384092 107 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 MT-TH-201ENST00000387441 69 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 SEPT14P4-201ENST00000513445 186 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 RNU6-864P-201ENST00000516256 108 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 RNU6-500P-201ENST00000362349 107 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 RNU6-636P-201ENST00000384598 107 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.48□□□□□ -2.65
SPTA1P02549 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.48□□□□□ -2.65
SPTA1P02549 MTND2P39-201ENST00000457230 764 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 MIR4536-1-201ENST00000583537 88 ntBASIC-1.48□□□□□ -2.65
SPTA1P02549 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 ELOCP20-201ENST00000422460 345 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 MTND3P16-201ENST00000452205 344 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 SNRPGP8-201ENST00000454064 226 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 MIR376B-201ENST00000614515 100 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 TRDV1-202ENST00000621643 102 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms