Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 Y_RNA.778-201ENST00000620203 90 ntBASIC0.43□□□□□ -2.34
TSPAN1O60635 Y_RNA.150-201ENST00000363562 102 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 Y_RNA.298-201ENST00000364960 107 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 RNU6-449P-201ENST00000383914 107 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 RNU6-535P-201ENST00000384722 107 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 RNU6-1104P-201ENST00000384723 104 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 RNU6-394P-201ENST00000410735 107 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 RNU7-197P-201ENST00000458836 62 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 RNU6-182P-201ENST00000516970 105 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 AC138749.4-201ENST00000563970 127 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 MIR6779-201ENST00000617283 64 ntBASIC0.42□□□□□ -2.34
TSPAN1O60635 SNORA8.2-201ENST00000384372 139 ntBASIC0.41□□□□□ -2.34
TSPAN1O60635 MIR7-2-201ENST00000384970 110 ntBASIC0.41□□□□□ -2.34
TSPAN1O60635 AC010487.4-201ENST00000637027 61 ntBASIC0.41□□□□□ -2.34
TSPAN1O60635 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
TSPAN1O60635 RNA5SP245-201ENST00000364239 121 ntBASIC0.4□□□□□ -2.35
TSPAN1O60635 MIR518A1-201ENST00000385068 85 ntBASIC0.4□□□□□ -2.35
TSPAN1O60635 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
TSPAN1O60635 RNU6-1194P-201ENST00000516208 104 ntBASIC0.4□□□□□ -2.35
TSPAN1O60635 RNU6-469P-201ENST00000516253 101 ntBASIC0.4□□□□□ -2.35
TSPAN1O60635 AL137067.1-201ENST00000615933 120 ntBASIC0.4□□□□□ -2.35
TSPAN1O60635 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
TSPAN1O60635 Y_RNA.580-201ENST00000391004 95 ntBASIC0.39□□□□□ -2.35
TSPAN1O60635 PCNPP3-201ENST00000393579 471 ntBASIC0.39□□□□□ -2.35
TSPAN1O60635 RNU4-69P-201ENST00000410677 143 ntBASIC0.39□□□□□ -2.35
TSPAN1O60635 RNY4P20-201ENST00000516678 93 ntBASIC0.39□□□□□ -2.35
TSPAN1O60635 MIR3144-201ENST00000579460 79 ntBASIC0.39□□□□□ -2.35
TSPAN1O60635 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TSPAN1O60635 Y_RNA.119-201ENST00000363301 96 ntBASIC0.38□□□□□ -2.35
TSPAN1O60635 SNORA63.5-201ENST00000363548 123 ntBASIC0.38□□□□□ -2.35
TSPAN1O60635 RNU6-915P-201ENST00000364943 103 ntBASIC0.38□□□□□ -2.35
TSPAN1O60635 Y_RNA.398-201ENST00000383952 99 ntBASIC0.38□□□□□ -2.35
TSPAN1O60635 MIR193B-201ENST00000384907 83 ntBASIC0.38□□□□□ -2.35
TSPAN1O60635 SUMO1P3-201ENST00000439961 304 ntBASIC0.38□□□□□ -2.35
TSPAN1O60635 RNU4-58P-201ENST00000363192 141 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 SNORD114-10-201ENST00000363409 72 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 SNORD118-201ENST00000363593 134 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 Y_RNA.205-201ENST00000364128 113 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 RNU6-1321P-201ENST00000390905 107 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 SNORD71-201ENST00000411292 86 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 MTND5P41-201ENST00000517498 206 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 MIR3121-201ENST00000579680 77 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 FTX_2.1-201ENST00000618816 94 ntBASIC0.37□□□□□ -2.35
TSPAN1O60635 Y_RNA.174-201ENST00000363781 105 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 Y_RNA.270-201ENST00000364693 104 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 Y_RNA.294-201ENST00000364916 102 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 RNU6-886P-201ENST00000384319 105 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 RNU6-1307P-201ENST00000391012 103 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 MIR513C-201ENST00000401352 84 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 RNA5SP272-201ENST00000516095 111 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 IGKV1-22-201ENST00000524313 326 ntBASIC0.36□□□□□ -2.35
TSPAN1O60635 MIR206-201ENST00000384872 86 ntBASIC0.35□□□□□ -2.35
TSPAN1O60635 RNA5SP268-201ENST00000516828 124 ntBASIC0.35□□□□□ -2.35
TSPAN1O60635 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.35□□□□□ -2.35
TSPAN1O60635 MIR101-2-201ENST00000362195 79 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 RNY1P2-201ENST00000364820 117 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 Y_RNA.299-201ENST00000364973 94 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 MT-TI-201ENST00000387365 69 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 SNRPGP12-201ENST00000449481 213 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 Y_RNA.692-201ENST00000516627 105 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 MIR1273G-201ENST00000577677 100 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 AC021753.1-201ENST00000635724 168 ntBASIC0.34□□□□□ -2.36
TSPAN1O60635 Y_RNA.448-201ENST00000384185 108 ntBASIC0.33□□□□□ -2.36
TSPAN1O60635 RNU6-616P-201ENST00000384353 107 ntBASIC0.33□□□□□ -2.36
TSPAN1O60635 SNORD28-201ENST00000384706 75 ntBASIC0.33□□□□□ -2.36
TSPAN1O60635 MIR548X2-201ENST00000579776 100 ntBASIC0.33□□□□□ -2.36
TSPAN1O60635 AC098479.1-201ENST00000609225 154 ntBASIC0.33□□□□□ -2.36
TSPAN1O60635 Y_RNA.114-201ENST00000363265 113 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 Y_RNA.215-201ENST00000364204 112 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 RNU6-1229P-201ENST00000364295 107 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 Y_RNA.420-201ENST00000384043 110 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 SNORD77B-201ENST00000391112 67 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 RNA5SP47-201ENST00000517230 109 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 AP001328.1-201ENST00000528550 176 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 MIR4500-201ENST00000579472 76 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 MIR7107-201ENST00000611489 80 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 AC244669.1-204ENST00000621564 178 ntBASIC0.32□□□□□ -2.36
TSPAN1O60635 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
TSPAN1O60635 Y_RNA.49-201ENST00000362714 112 ntBASIC0.31□□□□□ -2.36
TSPAN1O60635 Y_RNA.400-201ENST00000383963 111 ntBASIC0.31□□□□□ -2.36
TSPAN1O60635 MIR569-201ENST00000385228 96 ntBASIC0.31□□□□□ -2.36
TSPAN1O60635 RNA5SP227-201ENST00000516184 113 ntBASIC0.31□□□□□ -2.36
TSPAN1O60635 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
TSPAN1O60635 SCARNA16.5-201ENST00000517114 183 ntBASIC0.31□□□□□ -2.36
TSPAN1O60635 Y_RNA.56-201ENST00000362798 112 ntBASIC0.3□□□□□ -2.36
TSPAN1O60635 MIRLET7F2-201ENST00000385277 83 ntBASIC0.3□□□□□ -2.36
TSPAN1O60635 RNU7-48P-201ENST00000458875 63 ntBASIC0.3□□□□□ -2.36
TSPAN1O60635 RNU7-6P-201ENST00000516845 62 ntBASIC0.3□□□□□ -2.36
TSPAN1O60635 MIR4639-201ENST00000584938 69 ntBASIC0.3□□□□□ -2.36
TSPAN1O60635 RNU6-429P-201ENST00000384582 108 ntBASIC0.29□□□□□ -2.36
TSPAN1O60635 RN7SKP19-201ENST00000516016 252 ntBASIC0.29□□□□□ -2.36
TSPAN1O60635 RNU7-2P-201ENST00000516096 62 ntBASIC0.29□□□□□ -2.36
TSPAN1O60635 AP001340.1-201ENST00000624405 217 ntBASIC0.29□□□□□ -2.36
TSPAN1O60635 MIR6828-201ENST00000636181 60 ntBASIC0.29□□□□□ -2.36
TSPAN1O60635 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
TSPAN1O60635 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms