Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.99□□□□□ -2.73
COL6A5A8TX70 AC062037.1-201ENST00000605302 128 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 Y_RNA.43-201ENST00000362670 111 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 Y_RNA.184-201ENST00000363884 108 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 RNU6-801P-201ENST00000364087 105 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 MIR548A1-201ENST00000385041 97 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 RNU6-554P-201ENST00000410466 106 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 RNU6-693P-201ENST00000516134 107 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 RNU6-1198P-201ENST00000516904 67 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 SNORD36A-201ENST00000362874 73 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 RNU6-598P-201ENST00000364017 105 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 RNU2-66P-201ENST00000410650 161 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-2□□□□□ -2.73
COL6A5A8TX70 ADI1P3-201ENST00000549509 470 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 TRDV1-202ENST00000621643 102 ntBASIC-2□□□□□ -2.73
COL6A5A8TX70 RNU5A-8P-201ENST00000364102 114 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 RNU6-744P-201ENST00000365557 107 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 RNU6-300P-201ENST00000459080 104 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 SNORD36C-201ENST00000516733 66 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 AC006566.1-201ENST00000608943 513 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 MIR206-201ENST00000384872 86 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 RNA5SP494-201ENST00000410653 129 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 SNORD67.1-201ENST00000516618 108 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 AC012409.4-201ENST00000612923 249 ntBASIC-2.01□□□□□ -2.73
COL6A5A8TX70 RNU6-660P-201ENST00000364566 109 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 RNU6-243P-201ENST00000391140 107 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 RPS29P25-201ENST00000481709 171 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 RNU6-518P-201ENST00000516056 96 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 RNU6-62P-201ENST00000516526 102 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 RNU7-137P-201ENST00000516788 62 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 AC016252.1-201ENST00000609721 474 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 AP002782.1-201ENST00000623107 614 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 RNU6-935P-201ENST00000410371 100 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 RMST_3.1-201ENST00000611651 109 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 AC122108.2-201ENST00000611946 526 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 AC011476.5-201ENST00000615594 130 ntBASIC-2.02□□□□□ -2.73
COL6A5A8TX70 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 RNU6-957P-201ENST00000363652 99 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 MIR217-201ENST00000384817 110 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 RNA5SP54-201ENST00000516951 92 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 AL022161.1-201ENST00000604390 213 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 MIR4696-201ENST00000581431 70 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 U6.115-201ENST00000636045 103 ntBASIC-2.03□□□□□ -2.73
COL6A5A8TX70 SNORD1B-201ENST00000363091 84 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 RNU5F-3P-201ENST00000363767 117 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 MIR125B1-201ENST00000385236 88 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 SNORD115.2-201ENST00000391126 59 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 snoU13.17-201ENST00000458802 104 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 MIR5692C2-201ENST00000577959 77 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-2.04□□□□□ -2.74
COL6A5A8TX70 AC092574.1-201ENST00000609771 420 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 MIR548A3-201ENST00000385297 97 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 AL603910.2-201ENST00000407268 136 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 AC009961.2-201ENST00000435771 251 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 RNU6-551P-201ENST00000516661 103 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 AC073539.2-201ENST00000597113 165 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 AC073534.2-201ENST00000620377 381 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 5S_rRNA.13-201ENST00000622298 123 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 RNU6-280P-201ENST00000364145 104 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 SNORD116-9-201ENST00000384000 95 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 SNORD116-3-201ENST00000384287 95 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 SNORD116-8-201ENST00000384365 95 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 SNORD116-7-201ENST00000384404 95 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 SNORD116-5-201ENST00000384462 95 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 U3.27-201ENST00000391237 200 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 RNU6-564P-201ENST00000410983 104 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 UBL5P4-201ENST00000562584 236 ntBASIC-2.04□□□□□ -2.74
COL6A5A8TX70 Y_RNA.242-201ENST00000364473 110 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 RNU6-601P-201ENST00000384540 107 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 Y_RNA.587-201ENST00000391210 103 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 RNU6-607P-201ENST00000411283 108 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 RNU7-149P-201ENST00000516739 59 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 AC091144.1-201ENST00000519573 138 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 SNORD116-11-201ENST00000383882 92 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 RNA5SP144-201ENST00000410846 116 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 RNU6-893P-201ENST00000458841 100 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 RNU7-48P-201ENST00000458875 63 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 AC024909.2-201ENST00000553035 286 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 AC026741.1-201ENST00000605892 482 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 AC072046.2-201ENST00000618366 268 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 MIR6739-201ENST00000622461 75 ntBASIC-2.05□□□□□ -2.74
COL6A5A8TX70 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 Y_RNA.373-201ENST00000365600 103 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 MTND3P25-201ENST00000509243 135 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 AC093729.1-201ENST00000513074 128 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 RNU6-470P-201ENST00000515954 104 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 SNORD27-201ENST00000363981 72 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 SNORA36B-201ENST00000410438 131 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 USP9YP23-201ENST00000455085 407 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 RNU2-35P-201ENST00000516446 142 ntBASIC-2.06□□□□□ -2.74
COL6A5A8TX70 MIR6841-201ENST00000637129 72 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 230.8 ms