Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 RNU2-51P-201ENST00000410708 197 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 MTND1P1-201ENST00000445453 368 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 MIR5591-201ENST00000578248 65 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 MIR4464-201ENST00000580818 92 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 AC006006.1-201ENST00000603082 144 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 RNU2-4P-201ENST00000606190 192 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 MIR6818-201ENST00000621576 65 ntBASIC-1.65□□□□□ -2.67
TRAV17A0A0B4J275 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 SNORA62.4-201ENST00000365504 151 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 MIR29B1-201ENST00000385015 81 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-576P-201ENST00000390854 102 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-956P-201ENST00000458868 103 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 RNU2-35P-201ENST00000516446 142 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 RNA5SP461-201ENST00000516451 104 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-570P-201ENST00000517051 105 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 AL603755.1-201ENST00000619504 163 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.66□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-208P-201ENST00000362431 107 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-746P-201ENST00000384112 109 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-472P-201ENST00000384299 107 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 SNORD42B-201ENST00000458893 67 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 MIR5688-201ENST00000580619 83 ntBASIC-1.67□□□□□ -2.68
TRAV17A0A0B4J275 MIR365A-201ENST00000362260 87 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 SEPT14P8-201ENST00000508026 178 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 RNU7-2P-201ENST00000516096 62 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-264P-201ENST00000517134 104 ntBASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.68□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-957P-201ENST00000363652 99 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 RNU4-61P-201ENST00000411243 107 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 MIR4520-1-201ENST00000582609 70 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 SNORD113-5-201ENST00000607261 78 ntBASIC-1.69□□□□□ -2.68
TRAV17A0A0B4J275 SNORD36A-201ENST00000362874 73 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 SNORD27-201ENST00000363981 72 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 MIR216B-201ENST00000390186 82 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 RNU4-69P-201ENST00000410677 143 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-373P-201ENST00000411247 98 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 AL353803.5-201ENST00000599815 141 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 MIR6129-201ENST00000616087 109 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 MIR6888-201ENST00000621977 67 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 MIR1321-201ENST00000637766 79 ntBASIC-1.7□□□□□ -2.68
TRAV17A0A0B4J275 SNORD114-4-201ENST00000363962 75 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 SNORD114-3-201ENST00000364969 75 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 AL606845.1-201ENST00000404881 255 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 MIR1285-2-201ENST00000408311 88 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 SNORD63.1-201ENST00000516178 80 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 MIR4770-201ENST00000579149 58 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 MIR4308-201ENST00000580634 81 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 YWHAEP3-201ENST00000582767 121 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 AC119751.7-201ENST00000600494 245 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 AL445584.3-201ENST00000617173 78 ntBASIC-1.71□□□□□ -2.68
TRAV17A0A0B4J275 MIR34C-201ENST00000384831 77 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-243P-201ENST00000391140 107 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 AC107399.1-201ENST00000451226 265 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-559P-201ENST00000516151 98 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 RNU6-453P-201ENST00000516819 85 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 MIR4696-201ENST00000581431 70 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 VN1R91P-201ENST00000594377 169 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.72□□□□□ -2.68
TRAV17A0A0B4J275 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 SNORD101-201ENST00000384027 73 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 RNU6-662P-201ENST00000384253 104 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 RNU6-102P-201ENST00000384485 104 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 RNU6-561P-201ENST00000516222 102 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 AC015540.1-201ENST00000615828 501 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 AC022079.1-201ENST00000621546 602 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 AC091912.2-201ENST00000624798 167 ntBASIC-1.73□□□□□ -2.69
TRAV17A0A0B4J275 RNU6-664P-201ENST00000362381 107 ntBASIC-1.74□□□□□ -2.69
TRAV17A0A0B4J275 RNU6-226P-201ENST00000363778 107 ntBASIC-1.74□□□□□ -2.69
TRAV17A0A0B4J275 SNORA63.6-201ENST00000364921 119 ntBASIC-1.74□□□□□ -2.69
TRAV17A0A0B4J275 RNU6-259P-201ENST00000383999 107 ntBASIC-1.74□□□□□ -2.69
TRAV17A0A0B4J275 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms