Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC140658.3-201ENST00000567603 271 ntBASIC-1.9□□□□□ -2.71
TPM4P67936 RNU6-170P-201ENST00000362832 104 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 SNORD113-8-201ENST00000363497 74 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 RNA5SP25-201ENST00000410815 110 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 RNU7-30P-201ENST00000516835 62 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 SNORA40.17-201ENST00000517256 115 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 MIR548AE2-201ENST00000583456 67 ntBASIC-1.91□□□□□ -2.72
TPM4P67936 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 RNY1P6-201ENST00000384193 109 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 RNU6-102P-201ENST00000384485 104 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.92□□□□□ -2.72
TPM4P67936 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 MIR2113-201ENST00000459007 91 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 AC093783.1-201ENST00000612976 329 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 MIR8068-201ENST00000618032 68 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 AL138825.1-201ENST00000618587 192 ntBASIC-1.92□□□□□ -2.72
TPM4P67936 SNORD115-25-201ENST00000362619 82 ntBASIC-1.93□□□□□ -2.72
TPM4P67936 SNORD115-35-201ENST00000365122 82 ntBASIC-1.93□□□□□ -2.72
TPM4P67936 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.93□□□□□ -2.72
TPM4P67936 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.93□□□□□ -2.72
TPM4P67936 MIR382-201ENST00000637119 76 ntBASIC-1.93□□□□□ -2.72
TPM4P67936 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 MIR147A-201ENST00000385079 72 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 MT-TT-201ENST00000387460 66 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 RNU6-130P-201ENST00000411112 103 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 RNU7-48P-201ENST00000458875 63 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 SNORA40.14-201ENST00000516543 86 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 MIR3688-2-201ENST00000636963 87 ntBASIC-1.94□□□□□ -2.72
TPM4P67936 RNU4-90P-201ENST00000362773 141 ntBASIC-1.95□□□□□ -2.72
TPM4P67936 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.95□□□□□ -2.72
TPM4P67936 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.95□□□□□ -2.72
TPM4P67936 SNORA51.5-201ENST00000384126 131 ntBASIC-1.95□□□□□ -2.72
TPM4P67936 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.95□□□□□ -2.72
TPM4P67936 PART1_1.1-201ENST00000611761 217 ntBASIC-1.95□□□□□ -2.72
TPM4P67936 RNU6-973P-201ENST00000364690 107 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 RNU6-662P-201ENST00000384253 104 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 AC016907.1-201ENST00000419483 435 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 MTND4LP30-201ENST00000454092 297 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 SNORD116.3-201ENST00000517176 78 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 MIR3908-201ENST00000579798 126 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 snoU18.1-201ENST00000629629 71 ntBASIC-1.96□□□□□ -2.72
TPM4P67936 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.97□□□□□ -2.72
TPM4P67936 MIR652-201ENST00000385278 98 ntBASIC-1.97□□□□□ -2.72
TPM4P67936 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.97□□□□□ -2.72
TPM4P67936 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.97□□□□□ -2.72
TPM4P67936 AC082651.2-201ENST00000496833 166 ntBASIC-1.97□□□□□ -2.72
TPM4P67936 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.97□□□□□ -2.72
TPM4P67936 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.98□□□□□ -2.73
TPM4P67936 AL606845.1-201ENST00000404881 255 ntBASIC-1.98□□□□□ -2.73
TPM4P67936 RNU7-106P-201ENST00000459514 67 ntBASIC-1.98□□□□□ -2.73
TPM4P67936 RN7SKP19-201ENST00000516016 252 ntBASIC-1.98□□□□□ -2.73
TPM4P67936 AC007012.1-201ENST00000567192 175 ntBASIC-1.98□□□□□ -2.73
TPM4P67936 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.98□□□□□ -2.73
TPM4P67936 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.99□□□□□ -2.73
TPM4P67936 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.99□□□□□ -2.73
TPM4P67936 AP001362.1-201ENST00000625165 124 ntBASIC-1.99□□□□□ -2.73
TPM4P67936 Y_RNA.39-201ENST00000362620 98 ntBASIC-2□□□□□ -2.73
TPM4P67936 Y_RNA.785-201ENST00000384290 109 ntBASIC-2□□□□□ -2.73
TPM4P67936 RNU6-35P-201ENST00000384530 107 ntBASIC-2□□□□□ -2.73
TPM4P67936 RNU6-476P-201ENST00000384726 107 ntBASIC-2□□□□□ -2.73
TPM4P67936 RNU6-1046P-201ENST00000516538 107 ntBASIC-2□□□□□ -2.73
TPM4P67936 SNORA20.3-201ENST00000516880 132 ntBASIC-2□□□□□ -2.73
TPM4P67936 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2□□□□□ -2.73
TPM4P67936 Y_RNA.68-201ENST00000362881 102 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 RNU6-905P-201ENST00000384434 107 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 Y_RNA.531-201ENST00000384589 121 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 MTND1P29-201ENST00000448112 647 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 MIR1270-201ENST00000459320 83 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 RNU6-287P-201ENST00000516230 98 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.01□□□□□ -2.73
TPM4P67936 MIR4324-201ENST00000584846 72 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 MIR376A1-201ENST00000616574 68 ntBASIC-2.01□□□□□ -2.73
TPM4P67936 RNU6-571P-201ENST00000384128 107 ntBASIC-2.02□□□□□ -2.73
TPM4P67936 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.02□□□□□ -2.73
TPM4P67936 MIR206-201ENST00000384872 86 ntBASIC-2.02□□□□□ -2.73
TPM4P67936 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.02□□□□□ -2.73
TPM4P67936 MIR548AX-201ENST00000580117 73 ntBASIC-2.02□□□□□ -2.73
TPM4P67936 MTRNR2L2-201ENST00000604882 87 ntBASIC-2.02□□□□□ -2.73
TPM4P67936 MIR6854-201ENST00000614935 69 ntBASIC-2.02□□□□□ -2.73
TPM4P67936 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.03□□□□□ -2.73
TPM4P67936 SNORD74.6-201ENST00000364796 70 ntBASIC-2.03□□□□□ -2.73
TPM4P67936 RNU6-24P-201ENST00000384440 107 ntBASIC-2.03□□□□□ -2.73
TPM4P67936 SNORA79-201ENST00000408376 140 ntBASIC-2.03□□□□□ -2.73
TPM4P67936 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.03□□□□□ -2.73
TPM4P67936 AL606534.2-204ENST00000635008 178 ntBASIC-2.03□□□□□ -2.73
TPM4P67936 SNORA25.1-201ENST00000362326 128 ntBASIC-2.04□□□□□ -2.74
TPM4P67936 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.04□□□□□ -2.74
TPM4P67936 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.04□□□□□ -2.74
TPM4P67936 MIR616-201ENST00000385293 97 ntBASIC-2.04□□□□□ -2.74
TPM4P67936 SNORD2-201ENST00000459163 69 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms