Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 RNA5SP481-201ENST00000516814 122 ntBASIC3.09□□□□□ -1.91
SNPHO15079 SNORD59.2-201ENST00000516873 68 ntBASIC3.09□□□□□ -1.91
SNPHO15079 DEFB122-202ENST00000569013 197 ntBASIC3.09□□□□□ -1.91
SNPHO15079 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNPHO15079 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.08□□□□□ -1.92
SNPHO15079 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNPHO15079 MIR653-201ENST00000385279 96 ntBASIC3.08□□□□□ -1.92
SNPHO15079 MIR1283-2-201ENST00000408621 87 ntBASIC3.08□□□□□ -1.92
SNPHO15079 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
SNPHO15079 SNORA40.17-201ENST00000517256 115 ntBASIC3.08□□□□□ -1.92
SNPHO15079 MIR4276-201ENST00000584832 70 ntBASIC3.08□□□□□ -1.92
SNPHO15079 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.08□□□□□ -1.92
SNPHO15079 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SNPHO15079 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNPHO15079 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNPHO15079 RNU6-203P-201ENST00000384038 104 ntBASIC3.07□□□□□ -1.92
SNPHO15079 AL359511.1-201ENST00000402970 211 ntBASIC3.07□□□□□ -1.92
SNPHO15079 RNU7-26P-201ENST00000458980 63 ntBASIC3.07□□□□□ -1.92
SNPHO15079 AC138907.6-201ENST00000568401 126 ntBASIC3.07□□□□□ -1.92
SNPHO15079 AC138869.1-201ENST00000568623 124 ntBASIC3.07□□□□□ -1.92
SNPHO15079 AC073476.4-201ENST00000628409 72 ntBASIC3.07□□□□□ -1.92
SNPHO15079 MIR6516-201ENST00000630554 81 ntBASIC3.07□□□□□ -1.92
SNPHO15079 AL365361.1-201ENST00000566942 3481 ntBASIC3.07□□□□□ -1.92
SNPHO15079 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNPHO15079 RNU6-54P-201ENST00000365563 107 ntBASIC3.06□□□□□ -1.92
SNPHO15079 SNORD21-201ENST00000383953 95 ntBASIC3.06□□□□□ -1.92
SNPHO15079 MT-TN-201ENST00000387400 73 ntBASIC3.06□□□□□ -1.92
SNPHO15079 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
SNPHO15079 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
SNPHO15079 MIR2115-201ENST00000516657 100 ntBASIC3.06□□□□□ -1.92
SNPHO15079 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.06□□□□□ -1.92
SNPHO15079 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.06□□□□□ -1.92
SNPHO15079 MIR3651-201ENST00000630427 90 ntBASIC3.06□□□□□ -1.92
SNPHO15079 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNPHO15079 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SNPHO15079 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNPHO15079 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNPHO15079 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
SNPHO15079 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
SNPHO15079 snoU13.25-201ENST00000458945 104 ntBASIC3.05□□□□□ -1.92
SNPHO15079 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
SNPHO15079 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNPHO15079 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
SNPHO15079 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNPHO15079 SNORA38.1-201ENST00000364172 131 ntBASIC3.04□□□□□ -1.92
SNPHO15079 RNU6-990P-201ENST00000364385 104 ntBASIC3.04□□□□□ -1.92
SNPHO15079 U8.9-201ENST00000365667 134 ntBASIC3.04□□□□□ -1.92
SNPHO15079 SNORA48.1-201ENST00000390879 135 ntBASIC3.04□□□□□ -1.92
SNPHO15079 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
SNPHO15079 AL157398.1-201ENST00000452981 186 ntBASIC3.04□□□□□ -1.92
SNPHO15079 RN7SL274P-201ENST00000492268 272 ntBASIC3.04□□□□□ -1.92
SNPHO15079 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
SNPHO15079 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNPHO15079 MIR7-2-201ENST00000384970 110 ntBASIC3.03□□□□□ -1.92
SNPHO15079 SNORD41-201ENST00000386967 70 ntBASIC3.03□□□□□ -1.92
SNPHO15079 MIR18B-201ENST00000454574 71 ntBASIC3.03□□□□□ -1.92
SNPHO15079 SNORD42B-201ENST00000458893 67 ntBASIC3.03□□□□□ -1.92
SNPHO15079 RNU7-185P-201ENST00000459215 60 ntBASIC3.03□□□□□ -1.92
SNPHO15079 RNU1-143P-201ENST00000516296 146 ntBASIC3.03□□□□□ -1.92
SNPHO15079 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.03□□□□□ -1.92
SNPHO15079 U1.23-201ENST00000610293 146 ntBASIC3.03□□□□□ -1.92
SNPHO15079 RNU1-68P-201ENST00000615382 146 ntBASIC3.03□□□□□ -1.92
SNPHO15079 U1.39-201ENST00000621562 146 ntBASIC3.03□□□□□ -1.92
SNPHO15079 RNA5SP501-201ENST00000410990 112 ntBASIC3.02□□□□□ -1.93
SNPHO15079 snoU13.21-201ENST00000459368 105 ntBASIC3.02□□□□□ -1.93
SNPHO15079 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
SNPHO15079 MIR548AG2-201ENST00000581228 64 ntBASIC3.02□□□□□ -1.93
SNPHO15079 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SNPHO15079 MIR6739-201ENST00000622461 75 ntBASIC3.02□□□□□ -1.93
SNPHO15079 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
SNPHO15079 SNORA2.1-201ENST00000363089 137 ntBASIC3.01□□□□□ -1.93
SNPHO15079 SNORD113-2-201ENST00000391082 72 ntBASIC3.01□□□□□ -1.93
SNPHO15079 RNU6-1250P-201ENST00000391218 107 ntBASIC3.01□□□□□ -1.93
SNPHO15079 RNU6-994P-201ENST00000410507 111 ntBASIC3.01□□□□□ -1.93
SNPHO15079 RNU6-922P-201ENST00000516753 99 ntBASIC3.01□□□□□ -1.93
SNPHO15079 U4.4-201ENST00000620626 117 ntBASIC3.01□□□□□ -1.93
SNPHO15079 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SNPHO15079 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3□□□□□ -1.93
SNPHO15079 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
SNPHO15079 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNPHO15079 RNU6-1123P-201ENST00000362347 106 ntBASIC3□□□□□ -1.93
SNPHO15079 HIST1H2APS3-201ENST00000403259 134 ntBASIC3□□□□□ -1.93
SNPHO15079 RNU7-119P-201ENST00000459279 63 ntBASIC3□□□□□ -1.93
SNPHO15079 uc_338.1-201ENST00000612113 180 ntBASIC3□□□□□ -1.93
SNPHO15079 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNPHO15079 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNPHO15079 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
SNPHO15079 AC055731.1-201ENST00000474387 401 ntBASIC2.99□□□□□ -1.93
SNPHO15079 RNU6-231P-201ENST00000517122 103 ntBASIC2.99□□□□□ -1.93
SNPHO15079 SCARNA20.6-201ENST00000517251 106 ntBASIC2.99□□□□□ -1.93
SNPHO15079 MIR3126-201ENST00000577443 74 ntBASIC2.99□□□□□ -1.93
SNPHO15079 MIR7112-201ENST00000616126 65 ntBASIC2.99□□□□□ -1.93
SNPHO15079 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.99□□□□□ -1.93
SNPHO15079 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SNPHO15079 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
SNPHO15079 SNORA41B-201ENST00000384785 128 ntBASIC2.98□□□□□ -1.93
SNPHO15079 MIR128-1-201ENST00000384921 82 ntBASIC2.98□□□□□ -1.93
SNPHO15079 SNORA48.2-201ENST00000390926 124 ntBASIC2.98□□□□□ -1.93
SNPHO15079 RNA5SP229-201ENST00000410809 99 ntBASIC2.98□□□□□ -1.93
SNPHO15079 MIR5680-201ENST00000577577 84 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms