Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 RNU6-103P-201ENST00000363686 107 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.262-201ENST00000364641 102 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.277-201ENST00000364754 102 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 MIR1302-6-201ENST00000408466 90 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 AC044792.1-201ENST00000593294 196 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 MIR7107-201ENST00000611489 80 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 MIR8062-201ENST00000621515 85 ntBASIC0.09□□□□□ -2.4
RPAP3Q9H6T3 MTND5P32-201ENST00000560711 1802 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.76-201ENST00000362931 109 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 RNU6-187P-201ENST00000384139 106 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.461-201ENST00000384263 103 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 RNU6-291P-201ENST00000384720 107 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 SNORD116-25-201ENST00000516517 92 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 MIR6755-201ENST00000619993 66 ntBASIC0.08□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 RNU6-978P-201ENST00000364371 103 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 RNY1P13-201ENST00000365030 105 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 RNU6-535P-201ENST00000384722 107 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 RNA5SP227-201ENST00000516184 113 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1149P-201ENST00000516810 97 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 SCARNA15-202ENST00000516881 127 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 U6.104-201ENST00000637979 90 ntBASIC0.07□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.308-201ENST00000365043 101 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.539-201ENST00000384635 107 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 RNU5E-9P-201ENST00000411164 104 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 RNU6-135P-201ENST00000516769 101 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 MIR378D2-201ENST00000580636 98 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 MIR4744-201ENST00000581563 82 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 AC011921.3-201ENST00000605540 361 ntBASIC0.06□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1227P-201ENST00000383981 107 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.518-201ENST00000384552 113 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 RNU6-493P-201ENST00000391321 108 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 PCNPP3-201ENST00000393579 471 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 RNU7-129P-201ENST00000516128 62 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 RNA5SP47-201ENST00000517230 109 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 DEFB131E-201ENST00000532329 154 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 RNU2-4P-201ENST00000606190 192 ntBASIC0.05□□□□□ -2.4
RPAP3Q9H6T3 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 RNA5SP245-201ENST00000364239 121 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.292-201ENST00000364904 97 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.352-201ENST00000365439 102 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.396-201ENST00000383949 103 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 RNU6-472P-201ENST00000384299 107 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.604-201ENST00000410574 102 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 RNU7-79P-201ENST00000516082 62 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 Y_RNA.757-201ENST00000578934 114 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 MIR4752-201ENST00000579672 72 ntBASIC0.04□□□□□ -2.4
RPAP3Q9H6T3 SNORD28-201ENST00000384706 75 ntBASIC0.03□□□□□ -2.4
RPAP3Q9H6T3 MIR624-201ENST00000385217 97 ntBASIC0.03□□□□□ -2.4
RPAP3Q9H6T3 RNU6-578P-201ENST00000390980 103 ntBASIC0.03□□□□□ -2.4
RPAP3Q9H6T3 RNU6-893P-201ENST00000458841 100 ntBASIC0.03□□□□□ -2.4
RPAP3Q9H6T3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.03□□□□□ -2.4
RPAP3Q9H6T3 AC104408.1-201ENST00000605241 170 ntBASIC0.03□□□□□ -2.4
RPAP3Q9H6T3 AC244669.1-204ENST00000621564 178 ntBASIC0.03□□□□□ -2.4
RPAP3Q9H6T3 SNORA9.1-201ENST00000362412 131 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 SNORA42.1-201ENST00000363515 137 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 RNU6-923P-201ENST00000364753 107 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 RNU6-531P-201ENST00000516694 104 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 Y_RNA.720-201ENST00000517166 92 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 MIR4639-201ENST00000584938 69 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 AC091304.10-201ENST00000641554 121 ntBASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
RPAP3Q9H6T3 SNORA63.5-201ENST00000363548 123 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 Y_RNA.422-201ENST00000384054 114 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 Y_RNA.515-201ENST00000384535 112 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 Y_RNA.574-201ENST00000384766 95 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 MIR643-201ENST00000385267 97 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 Y_RNA.797-201ENST00000515977 94 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 AP003072.1-201ENST00000531740 145 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
RPAP3Q9H6T3 SNORA32-201ENST00000384072 121 ntBASIC0□□□□□ -2.41
RPAP3Q9H6T3 RNU2-38P-201ENST00000410856 79 ntBASIC0□□□□□ -2.41
RPAP3Q9H6T3 RNU6-1232P-201ENST00000516299 86 ntBASIC0□□□□□ -2.41
RPAP3Q9H6T3 TUG1_4.1-201ENST00000619464 181 ntBASIC0□□□□□ -2.41
RPAP3Q9H6T3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 RNA5SP133-201ENST00000363368 119 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 MIR548F4-201ENST00000408515 105 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 RNU7-35P-201ENST00000517174 62 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 AC006504.6-201ENST00000590142 199 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 U6.109-201ENST00000636749 87 ntBASIC-0.01□□□□□ -2.41
RPAP3Q9H6T3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.02□□□□□ -2.41
RPAP3Q9H6T3 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms