Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RN7SKP12-201ENST00000516275 143 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNU6-521P-201ENST00000516663 105 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNA5SP33-201ENST00000516687 98 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 AC243994.1-201ENST00000618627 109 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 MIR452-201ENST00000385020 85 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.53□□□□□ -2.16
SNHG28P0DPA3 RNU6-733P-201ENST00000410759 104 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 snoU13.27-201ENST00000459278 104 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 SNORA31.17-201ENST00000516953 127 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 AC068338.1-201ENST00000565567 176 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 MIR4694-201ENST00000578534 80 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 U7.3-201ENST00000616123 62 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SNHG28P0DPA3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.220-201ENST00000364244 109 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNU6-409P-201ENST00000384114 104 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNA5SP465-201ENST00000391195 109 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 AC004941.2-201ENST00000427009 228 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNU7-73P-201ENST00000458743 63 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 SNORD3E-202ENST00000627253 216 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR424-201ENST00000362227 98 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNA5SP276-201ENST00000362580 94 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.73-201ENST00000362910 113 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNU4-36P-201ENST00000364294 144 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 SNORA1.1-201ENST00000364671 133 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR194-1-201ENST00000384892 85 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNU6-267P-201ENST00000516714 103 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 FAM71BP1-201ENST00000604431 523 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 AL773524.1-201ENST00000614065 229 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 SEPT14P17-201ENST00000617978 177 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR8065-201ENST00000620577 100 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU6-787P-201ENST00000384032 107 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 MIR450A2-201ENST00000385022 100 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU2-7P-201ENST00000410794 178 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 AC096949.1-201ENST00000412047 152 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 SNORA74.3-201ENST00000517108 154 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.5□□□□□ -2.17
SNHG28P0DPA3 MIR548AO-201ENST00000579992 96 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 AC020891.4-201ENST00000605745 93 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU6-602P-201ENST00000411155 105 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 snoU13.25-201ENST00000458945 104 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 TRMT112P2-201ENST00000512910 132 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 RNU7-41P-201ENST00000515917 61 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 MIR376B-201ENST00000614515 100 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.49□□□□□ -2.17
SNHG28P0DPA3 MIR2052-201ENST00000636055 55 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.49□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 SNORD115-35-201ENST00000365122 82 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 SNORA1.2-201ENST00000365189 134 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AL161935.2-201ENST00000414627 60 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AC109327.2-201ENST00000448339 378 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SNHG28P0DPA3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
SNHG28P0DPA3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-228P-201ENST00000362700 106 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-53P-201ENST00000365367 106 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-950P-201ENST00000384651 107 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR34C-201ENST00000384831 77 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR206-201ENST00000384872 86 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-972P-201ENST00000391208 107 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 AL451046.2-201ENST00000403074 277 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 AC244636.1-201ENST00000421152 228 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNA5SP395-201ENST00000516567 118 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU7-53P-201ENST00000516705 60 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU7-35P-201ENST00000517174 62 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR3152-201ENST00000579801 74 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR4764-201ENST00000580680 88 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms