Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RN7SKP12-201ENST00000516275 143 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNU6-521P-201ENST00000516663 105 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNA5SP33-201ENST00000516687 98 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 AC243994.1-201ENST00000618627 109 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 MIR452-201ENST00000385020 85 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.53□□□□□ -2.16
SNHG28P0DPA3 RNU6-733P-201ENST00000410759 104 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 snoU13.27-201ENST00000459278 104 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 SNORA31.17-201ENST00000516953 127 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 AC068338.1-201ENST00000565567 176 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 MIR4694-201ENST00000578534 80 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 U7.3-201ENST00000616123 62 ntBASIC1.53□□□□□ -2.16
SNHG28P0DPA3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SNHG28P0DPA3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.220-201ENST00000364244 109 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNU6-409P-201ENST00000384114 104 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNA5SP465-201ENST00000391195 109 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 AC004941.2-201ENST00000427009 228 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNU7-73P-201ENST00000458743 63 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 SNORD3E-202ENST00000627253 216 ntBASIC1.52□□□□□ -2.17
SNHG28P0DPA3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR424-201ENST00000362227 98 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNA5SP276-201ENST00000362580 94 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.73-201ENST00000362910 113 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNU4-36P-201ENST00000364294 144 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 SNORA1.1-201ENST00000364671 133 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR194-1-201ENST00000384892 85 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNU6-267P-201ENST00000516714 103 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 FAM71BP1-201ENST00000604431 523 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 AL773524.1-201ENST00000614065 229 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 SEPT14P17-201ENST00000617978 177 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 MIR8065-201ENST00000620577 100 ntBASIC1.51□□□□□ -2.17
SNHG28P0DPA3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU6-787P-201ENST00000384032 107 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 MIR450A2-201ENST00000385022 100 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU2-7P-201ENST00000410794 178 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 AC096949.1-201ENST00000412047 152 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 SNORA74.3-201ENST00000517108 154 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.5□□□□□ -2.17
SNHG28P0DPA3 MIR548AO-201ENST00000579992 96 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 AC020891.4-201ENST00000605745 93 ntBASIC1.5□□□□□ -2.17
SNHG28P0DPA3 RNU6-602P-201ENST00000411155 105 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 snoU13.25-201ENST00000458945 104 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 TRMT112P2-201ENST00000512910 132 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 RNU7-41P-201ENST00000515917 61 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 MIR376B-201ENST00000614515 100 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.49□□□□□ -2.17
SNHG28P0DPA3 MIR2052-201ENST00000636055 55 ntBASIC1.49□□□□□ -2.17
SNHG28P0DPA3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.49□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 SNORD115-35-201ENST00000365122 82 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 SNORA1.2-201ENST00000365189 134 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AL161935.2-201ENST00000414627 60 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AC109327.2-201ENST00000448339 378 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
SNHG28P0DPA3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SNHG28P0DPA3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SNHG28P0DPA3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
SNHG28P0DPA3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-228P-201ENST00000362700 106 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-53P-201ENST00000365367 106 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-950P-201ENST00000384651 107 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR34C-201ENST00000384831 77 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR206-201ENST00000384872 86 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU6-972P-201ENST00000391208 107 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 AL451046.2-201ENST00000403074 277 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 AC244636.1-201ENST00000421152 228 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNA5SP395-201ENST00000516567 118 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU7-53P-201ENST00000516705 60 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 RNU7-35P-201ENST00000517174 62 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR3152-201ENST00000579801 74 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR4764-201ENST00000580680 88 ntBASIC1.47□□□□□ -2.17
SNHG28P0DPA3 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms