Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PITPNM1O00562 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PITPNM1O00562 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PITPNM1O00562 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.66□□□□□ -1.82
PITPNM1O00562 RNU6-838P-201ENST00000363399 108 ntBASIC3.66□□□□□ -1.82
PITPNM1O00562 SNORA80A-201ENST00000363922 136 ntBASIC3.66□□□□□ -1.82
PITPNM1O00562 RNU6-765P-201ENST00000516916 99 ntBASIC3.66□□□□□ -1.82
PITPNM1O00562 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.66□□□□□ -1.82
PITPNM1O00562 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PITPNM1O00562 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PITPNM1O00562 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PITPNM1O00562 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.65□□□□□ -1.82
PITPNM1O00562 Y_RNA.13-201ENST00000362403 112 ntBASIC3.65□□□□□ -1.83
PITPNM1O00562 SNORA48.1-201ENST00000390879 135 ntBASIC3.65□□□□□ -1.83
PITPNM1O00562 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
PITPNM1O00562 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PITPNM1O00562 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.65□□□□□ -1.83
PITPNM1O00562 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.64□□□□□ -1.83
PITPNM1O00562 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
PITPNM1O00562 AC025033.1-201ENST00000463883 194 ntBASIC3.64□□□□□ -1.83
PITPNM1O00562 RN7SKP83-201ENST00000516512 178 ntBASIC3.64□□□□□ -1.83
PITPNM1O00562 MIR3192-201ENST00000584920 77 ntBASIC3.64□□□□□ -1.83
PITPNM1O00562 AC022202.1-201ENST00000613515 211 ntBASIC3.64□□□□□ -1.83
PITPNM1O00562 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PITPNM1O00562 Y_RNA.224-201ENST00000364308 111 ntBASIC3.63□□□□□ -1.83
PITPNM1O00562 Y_RNA.330-201ENST00000365230 109 ntBASIC3.63□□□□□ -1.83
PITPNM1O00562 SNORA44-201ENST00000384584 132 ntBASIC3.63□□□□□ -1.83
PITPNM1O00562 RN7SL274P-201ENST00000492268 272 ntBASIC3.63□□□□□ -1.83
PITPNM1O00562 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
PITPNM1O00562 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PITPNM1O00562 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PITPNM1O00562 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
PITPNM1O00562 RN7SL863P-201ENST00000462370 296 ntBASIC3.62□□□□□ -1.83
PITPNM1O00562 XIST_intron.1-201ENST00000619444 68 ntBASIC3.62□□□□□ -1.83
PITPNM1O00562 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
PITPNM1O00562 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PITPNM1O00562 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PITPNM1O00562 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PITPNM1O00562 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PITPNM1O00562 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PITPNM1O00562 RNU6-698P-201ENST00000363523 107 ntBASIC3.61□□□□□ -1.83
PITPNM1O00562 RNU6-34P-201ENST00000364874 107 ntBASIC3.61□□□□□ -1.83
PITPNM1O00562 MIR548C-201ENST00000384815 97 ntBASIC3.61□□□□□ -1.83
PITPNM1O00562 DEFB122-202ENST00000569013 197 ntBASIC3.61□□□□□ -1.83
PITPNM1O00562 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PITPNM1O00562 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PITPNM1O00562 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PITPNM1O00562 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PITPNM1O00562 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PITPNM1O00562 AC104332.2-201ENST00000429959 156 ntBASIC3.6□□□□□ -1.83
PITPNM1O00562 RNU6-231P-201ENST00000517122 103 ntBASIC3.6□□□□□ -1.83
PITPNM1O00562 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.6□□□□□ -1.83
PITPNM1O00562 MIR548X-201ENST00000580069 75 ntBASIC3.6□□□□□ -1.83
PITPNM1O00562 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.6□□□□□ -1.83
PITPNM1O00562 SNRPGP19-201ENST00000603826 189 ntBASIC3.6□□□□□ -1.83
PITPNM1O00562 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.6□□□□□ -1.83
PITPNM1O00562 MIR7106-201ENST00000612419 65 ntBASIC3.6□□□□□ -1.83
PITPNM1O00562 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.6□□□□□ -1.83
PITPNM1O00562 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PITPNM1O00562 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.6□□□□□ -1.83
PITPNM1O00562 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PITPNM1O00562 MIR1283-2-201ENST00000408621 87 ntBASIC3.59□□□□□ -1.83
PITPNM1O00562 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
PITPNM1O00562 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.59□□□□□ -1.83
PITPNM1O00562 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PITPNM1O00562 ZNF355P-201ENST00000427301 3216 ntBASIC3.59□□□□□ -1.84
PITPNM1O00562 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PITPNM1O00562 MIR517B-201ENST00000385102 67 ntBASIC3.58□□□□□ -1.84
PITPNM1O00562 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PITPNM1O00562 RNA5SP465-201ENST00000391195 109 ntBASIC3.58□□□□□ -1.84
PITPNM1O00562 HMGN2P3-201ENST00000433603 273 ntBASIC3.58□□□□□ -1.84
PITPNM1O00562 HMGN2P5-201ENST00000436882 273 ntBASIC3.58□□□□□ -1.84
PITPNM1O00562 AL033523.1-201ENST00000605153 153 ntBASIC3.58□□□□□ -1.84
PITPNM1O00562 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
PITPNM1O00562 AC108206.1-201ENST00000570186 4159 ntBASIC3.58□□□□□ -1.84
PITPNM1O00562 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PITPNM1O00562 SNORA7.4-201ENST00000384249 137 ntBASIC3.57□□□□□ -1.84
PITPNM1O00562 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.57□□□□□ -1.84
PITPNM1O00562 AL157398.1-201ENST00000452981 186 ntBASIC3.57□□□□□ -1.84
PITPNM1O00562 RNU7-185P-201ENST00000459215 60 ntBASIC3.57□□□□□ -1.84
PITPNM1O00562 RN7SL330P-201ENST00000469709 307 ntBASIC3.57□□□□□ -1.84
PITPNM1O00562 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PITPNM1O00562 MIR5047-201ENST00000579212 100 ntBASIC3.57□□□□□ -1.84
PITPNM1O00562 MIR6516-201ENST00000630554 81 ntBASIC3.57□□□□□ -1.84
PITPNM1O00562 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PITPNM1O00562 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PITPNM1O00562 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PITPNM1O00562 MIR1257-201ENST00000408490 117 ntBASIC3.56□□□□□ -1.84
PITPNM1O00562 AC055731.1-201ENST00000474387 401 ntBASIC3.56□□□□□ -1.84
PITPNM1O00562 MIR4672-201ENST00000583126 81 ntBASIC3.56□□□□□ -1.84
PITPNM1O00562 MIR548O2-201ENST00000616090 70 ntBASIC3.56□□□□□ -1.84
PITPNM1O00562 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.56□□□□□ -1.84
PITPNM1O00562 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.56□□□□□ -1.84
PITPNM1O00562 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PITPNM1O00562 RNU6-580P-201ENST00000365159 107 ntBASIC3.55□□□□□ -1.84
PITPNM1O00562 MIR591-201ENST00000385290 95 ntBASIC3.55□□□□□ -1.84
PITPNM1O00562 SNORA40.17-201ENST00000517256 115 ntBASIC3.55□□□□□ -1.84
PITPNM1O00562 MIR2682-201ENST00000580305 110 ntBASIC3.55□□□□□ -1.84
PITPNM1O00562 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PITPNM1O00562 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms