Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-392P-201ENST00000364926 101 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 RNU6-1190P-201ENST00000410811 104 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 RPS3AP1-201ENST00000413190 320 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.72□□□□□ -2.13
RTF1Q92541 AC004223.1-201ENST00000479840 271 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 AL133373.1-201ENST00000497098 94 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 RNU7-123P-201ENST00000515911 60 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 RNU2-35P-201ENST00000516446 142 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 AL512310.8-201ENST00000550183 120 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 MTND5P18-201ENST00000445624 1801 ntBASIC1.72□□□□□ -2.13
RTF1Q92541 SNORA22.1-201ENST00000362701 134 ntBASIC1.71□□□□□ -2.14
RTF1Q92541 Y_RNA.198-201ENST00000364013 98 ntBASIC1.71□□□□□ -2.14
RTF1Q92541 RNU6-735P-201ENST00000410612 107 ntBASIC1.71□□□□□ -2.14
RTF1Q92541 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
RTF1Q92541 Y_RNA.354-201ENST00000365448 111 ntBASIC1.7□□□□□ -2.14
RTF1Q92541 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RTF1Q92541 SNORA40.6-201ENST00000391153 128 ntBASIC1.7□□□□□ -2.14
RTF1Q92541 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
RTF1Q92541 RNU6-947P-201ENST00000516264 106 ntBASIC1.7□□□□□ -2.14
RTF1Q92541 RNU6-902P-201ENST00000517212 91 ntBASIC1.7□□□□□ -2.14
RTF1Q92541 MIR3660-201ENST00000584845 100 ntBASIC1.7□□□□□ -2.14
RTF1Q92541 MIR6078-201ENST00000611069 100 ntBASIC1.7□□□□□ -2.14
RTF1Q92541 SNORD115-2-201ENST00000362842 82 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 Y_RNA.213-201ENST00000364178 111 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 SNORD115-20-201ENST00000365099 82 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 RNU6-1056P-201ENST00000383996 107 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 HMGN1P33-201ENST00000432945 451 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 SNORD33.1-201ENST00000516213 88 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 RNU6-165P-201ENST00000517170 99 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 AP003716.2-201ENST00000528260 108 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 CYP3A52P-201ENST00000563326 91 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 AL670379.3-201ENST00000605040 251 ntBASIC1.69□□□□□ -2.14
RTF1Q92541 Y_RNA.531-201ENST00000384589 121 ntBASIC1.68□□□□□ -2.14
RTF1Q92541 RNU6-476P-201ENST00000384726 107 ntBASIC1.68□□□□□ -2.14
RTF1Q92541 RNU6-1064P-201ENST00000410626 104 ntBASIC1.68□□□□□ -2.14
RTF1Q92541 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.68□□□□□ -2.14
RTF1Q92541 snoU13.25-201ENST00000458945 104 ntBASIC1.68□□□□□ -2.14
RTF1Q92541 AC004812.1-201ENST00000540773 146 ntBASIC1.68□□□□□ -2.14
RTF1Q92541 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RTF1Q92541 RNU6-1144P-201ENST00000384247 104 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 MIR548A3-201ENST00000385297 97 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 MIR759-201ENST00000390224 91 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 MIR758-201ENST00000390227 88 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 RNU6-602P-201ENST00000411155 105 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 RNU7-113P-201ENST00000459273 62 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 AC113410.1-201ENST00000505029 247 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 RNU11-2P-201ENST00000516898 142 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 AL121890.5-201ENST00000620848 304 ntBASIC1.67□□□□□ -2.14
RTF1Q92541 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RTF1Q92541 Y_RNA.299-201ENST00000364973 94 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 Y_RNA.355-201ENST00000365462 98 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 SNORD38B-201ENST00000384690 67 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 MIR499A-201ENST00000384903 122 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 MIR1302-7-201ENST00000408841 72 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 RNU6-1054P-201ENST00000411293 104 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.66□□□□□ -2.14
RTF1Q92541 AL512326.2-201ENST00000426359 151 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 AC245047.7-201ENST00000440265 293 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 Y_RNA.649-201ENST00000459077 103 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.66□□□□□ -2.14
RTF1Q92541 RNU6-1258P-201ENST00000516911 111 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 MIR8065-201ENST00000620577 100 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 SNORD38B-202ENST00000625943 69 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 AL161722.3-201ENST00000605789 2983 ntBASIC1.66□□□□□ -2.14
RTF1Q92541 RNA5SP264-201ENST00000363115 107 ntBASIC1.65□□□□□ -2.15
RTF1Q92541 Y_RNA.171-201ENST00000363760 102 ntBASIC1.65□□□□□ -2.15
RTF1Q92541 RNU6-396P-201ENST00000365369 105 ntBASIC1.65□□□□□ -2.15
RTF1Q92541 RPS23P4-201ENST00000487908 423 ntBASIC1.65□□□□□ -2.15
RTF1Q92541 PRELID3BP2-201ENST00000605362 201 ntBASIC1.65□□□□□ -2.15
RTF1Q92541 MIR7974-201ENST00000615835 79 ntBASIC1.65□□□□□ -2.15
RTF1Q92541 MIR8070-201ENST00000616510 88 ntBASIC1.65□□□□□ -2.15
RTF1Q92541 SNORA25.3-201ENST00000363205 127 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 RNU6-1104P-201ENST00000384723 104 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 AC090844.1-201ENST00000422019 156 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 snoU13.18-201ENST00000459483 104 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 MIR3163-201ENST00000581592 73 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
RTF1Q92541 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RTF1Q92541 RNY4P6-201ENST00000363667 96 ntBASIC1.63□□□□□ -2.15
RTF1Q92541 SNORA25.9-201ENST00000365087 128 ntBASIC1.63□□□□□ -2.15
RTF1Q92541 RNU6-53P-201ENST00000365367 106 ntBASIC1.63□□□□□ -2.15
RTF1Q92541 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.63□□□□□ -2.15
RTF1Q92541 MIR2115-201ENST00000516657 100 ntBASIC1.63□□□□□ -2.15
RTF1Q92541 AC022523.2-201ENST00000561045 150 ntBASIC1.63□□□□□ -2.15
RTF1Q92541 MTND5P34-201ENST00000568888 325 ntBASIC1.63□□□□□ -2.15
RTF1Q92541 MIR103A2-201ENST00000362154 78 ntBASIC1.62□□□□□ -2.15
RTF1Q92541 MT-TN-201ENST00000387400 73 ntBASIC1.62□□□□□ -2.15
RTF1Q92541 MIR1185-1-201ENST00000408598 86 ntBASIC1.62□□□□□ -2.15
RTF1Q92541 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
RTF1Q92541 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.62□□□□□ -2.15
RTF1Q92541 RNA5SP33-201ENST00000516687 98 ntBASIC1.62□□□□□ -2.15
RTF1Q92541 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.62□□□□□ -2.15
RTF1Q92541 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms