Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNORD93-201ENST00000408813 74 ntBASIC0.48□□□□□ -2.33
CCDC188H7C350 RNU2-38P-201ENST00000410856 79 ntBASIC0.48□□□□□ -2.33
CCDC188H7C350 MIR3152-201ENST00000579801 74 ntBASIC0.48□□□□□ -2.33
CCDC188H7C350 MIR4282-201ENST00000583613 67 ntBASIC0.48□□□□□ -2.33
CCDC188H7C350 MIR5197-201ENST00000583721 112 ntBASIC0.48□□□□□ -2.33
CCDC188H7C350 MIR6717-201ENST00000622747 73 ntBASIC0.48□□□□□ -2.33
CCDC188H7C350 AC091932.4-201ENST00000623386 200 ntBASIC0.48□□□□□ -2.33
CCDC188H7C350 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC188H7C350 Y_RNA.47-201ENST00000362697 108 ntBASIC0.47□□□□□ -2.33
CCDC188H7C350 Y_RNA.618-201ENST00000410949 107 ntBASIC0.47□□□□□ -2.33
CCDC188H7C350 AL358176.2-201ENST00000425769 204 ntBASIC0.47□□□□□ -2.33
CCDC188H7C350 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC188H7C350 RNU6-561P-201ENST00000516222 102 ntBASIC0.47□□□□□ -2.33
CCDC188H7C350 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
CCDC188H7C350 AC092634.7-201ENST00000621022 103 ntBASIC0.47□□□□□ -2.33
CCDC188H7C350 RNU6-653P-201ENST00000363074 106 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 Y_RNA.292-201ENST00000364904 97 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 RNA5SP117-201ENST00000365294 118 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 RNU6-472P-201ENST00000384299 107 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 MIR548F4-201ENST00000408515 105 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 SNORD116-25-201ENST00000516517 92 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 MIR4744-201ENST00000581563 82 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
CCDC188H7C350 SNORD27-201ENST00000363981 72 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 RNU6-1011P-201ENST00000384668 107 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 RNU6-493P-201ENST00000391321 108 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 Y_RNA.797-201ENST00000515977 94 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 RNA5SP395-201ENST00000516567 118 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 AL117187.1-201ENST00000555482 181 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 MIR4643-201ENST00000577473 78 ntBASIC0.45□□□□□ -2.34
CCDC188H7C350 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 MIR1302-3-201ENST00000408128 138 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 RNU4-83P-201ENST00000410863 133 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 SNORA25.12-201ENST00000516202 82 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 AC090897.1-201ENST00000580909 226 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 AC008608.1-201ENST00000603910 127 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 AL360085.1-201ENST00000604713 532 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 RNU2-4P-201ENST00000606190 192 ntBASIC0.44□□□□□ -2.34
CCDC188H7C350 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
CCDC188H7C350 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
CCDC188H7C350 RNU6-469P-201ENST00000516253 101 ntBASIC0.43□□□□□ -2.34
CCDC188H7C350 AL365205.2-201ENST00000594586 68 ntBASIC0.43□□□□□ -2.34
CCDC188H7C350 MIR376A2-201ENST00000636782 80 ntBASIC0.43□□□□□ -2.34
CCDC188H7C350 MIR30D-201ENST00000362283 70 ntBASIC0.42□□□□□ -2.34
CCDC188H7C350 Y_RNA.76-201ENST00000362931 109 ntBASIC0.42□□□□□ -2.34
CCDC188H7C350 RNU6-403P-201ENST00000363163 104 ntBASIC0.42□□□□□ -2.34
CCDC188H7C350 RNU6-1292P-201ENST00000383856 107 ntBASIC0.42□□□□□ -2.34
CCDC188H7C350 RNY3P16-201ENST00000516338 101 ntBASIC0.42□□□□□ -2.34
CCDC188H7C350 RNU6-448P-201ENST00000517052 107 ntBASIC0.42□□□□□ -2.34
CCDC188H7C350 SNORD92-201ENST00000585078 85 ntBASIC0.42□□□□□ -2.34
CCDC188H7C350 Y_RNA.65-201ENST00000362846 100 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 Y_RNA.515-201ENST00000384535 112 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 Y_RNA.518-201ENST00000384552 113 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 MIR563-201ENST00000385080 79 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 SNORA26.6-201ENST00000391256 115 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 MIR1197-201ENST00000408818 88 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 RNU4-43P-201ENST00000410628 137 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC188H7C350 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 MIR378D2-201ENST00000580636 98 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 AL662814.1-201ENST00000617364 121 ntBASIC0.41□□□□□ -2.34
CCDC188H7C350 Y_RNA.182-201ENST00000363880 111 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 RNU4-16P-201ENST00000364737 141 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 RNU6-923P-201ENST00000364753 107 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 SNORA72.6-201ENST00000384520 129 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 RNU6-578P-201ENST00000390980 103 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 SNORD100-201ENST00000408573 76 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.4□□□□□ -2.35
CCDC188H7C350 SNORA22.1-201ENST00000362701 134 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 Y_RNA.477-201ENST00000384352 108 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 RNU6-738P-201ENST00000384531 106 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 RNU4-70P-201ENST00000384579 139 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 SNORD127-201ENST00000458892 86 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 AC011921.3-201ENST00000605540 361 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 AC021613.1-201ENST00000623880 111 ntBASIC0.39□□□□□ -2.35
CCDC188H7C350 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
CCDC188H7C350 RNU6-597P-201ENST00000365620 102 ntBASIC0.38□□□□□ -2.35
CCDC188H7C350 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
CCDC188H7C350 Y_RNA.556-201ENST00000384677 113 ntBASIC0.38□□□□□ -2.35
CCDC188H7C350 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
CCDC188H7C350 Y_RNA.571-201ENST00000384753 98 ntBASIC0.38□□□□□ -2.35
CCDC188H7C350 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC188H7C350 MTND1P19-201ENST00000511780 315 ntBASIC0.38□□□□□ -2.35
CCDC188H7C350 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CCDC188H7C350 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
CCDC188H7C350 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
CCDC188H7C350 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 RNU6-694P-201ENST00000364071 147 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 SNORA25.7-201ENST00000364375 127 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 RNU6-643P-201ENST00000384018 107 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms