Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 RNU6-633P-201ENST00000362612 103 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 RNU6-1163P-201ENST00000364516 107 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 Y_RNA.316-201ENST00000365118 111 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 RNU6-424P-201ENST00000384367 105 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 BX510359.4-201ENST00000423750 193 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 HSPE1P9-201ENST00000440046 311 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 AC011753.1-201ENST00000451001 220 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 AC005786.1-201ENST00000588553 154 ntBASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RC3H2Q9HBD1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RC3H2Q9HBD1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.47□□□□□ -2.01
RC3H2Q9HBD1 DEFA7P-201ENST00000382676 285 ntBASIC2.47□□□□□ -2.01
RC3H2Q9HBD1 U8.16-201ENST00000391279 133 ntBASIC2.47□□□□□ -2.01
RC3H2Q9HBD1 MIR889-201ENST00000401280 79 ntBASIC2.47□□□□□ -2.01
RC3H2Q9HBD1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.47□□□□□ -2.01
RC3H2Q9HBD1 RNU6-86P-201ENST00000606534 107 ntBASIC2.47□□□□□ -2.01
RC3H2Q9HBD1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 SNORD115-27-201ENST00000364430 82 ntBASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 SNORA24-201ENST00000384096 131 ntBASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 HMGN2P23-201ENST00000456759 269 ntBASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 MIR3152-201ENST00000579801 74 ntBASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 MIR6717-201ENST00000622747 73 ntBASIC2.46□□□□□ -2.02
RC3H2Q9HBD1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 MIR6073-201ENST00000352083 89 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 RNU6-833P-201ENST00000363486 107 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 RNU6-913P-201ENST00000390913 95 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 Y_RNA.609-201ENST00000410669 89 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 RNA5SP270-201ENST00000411361 118 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 RNU6-958P-201ENST00000516995 106 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 SNORA28-201ENST00000606769 126 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 MIR4791-201ENST00000607666 84 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 MIR6873-201ENST00000622788 63 ntBASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.45□□□□□ -2.02
RC3H2Q9HBD1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 Y_RNA.370-201ENST00000365589 108 ntBASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 MIR516B2-201ENST00000385190 85 ntBASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 AL020996.3-201ENST00000606617 222 ntBASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
RC3H2Q9HBD1 RNA5SP99-201ENST00000364020 114 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 MIR206-201ENST00000384872 86 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 MIR597-201ENST00000384968 97 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 MIR221-201ENST00000385135 110 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 RPS29P29-201ENST00000456396 171 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 RNU7-2P-201ENST00000516096 62 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 RNA5SP168-201ENST00000516642 112 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 RNU7-53P-201ENST00000516705 60 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 MIR4712-201ENST00000583750 82 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 AC069114.2-201ENST00000604699 304 ntBASIC2.43□□□□□ -2.02
RC3H2Q9HBD1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 RNU6-1244P-201ENST00000363614 108 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 SNORA1.2-201ENST00000365189 134 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 SNORA70.7-201ENST00000384159 133 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 MIR34C-201ENST00000384831 77 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 MIR518A2-201ENST00000384966 87 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 RNU6-788P-201ENST00000390967 104 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 SNORD28B-201ENST00000390993 75 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 AL445685.2-201ENST00000422551 342 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 RNU7-67P-201ENST00000459003 62 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 DNAJC19P9-201ENST00000555084 351 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 MIR5094-201ENST00000578766 85 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 MIR6766-201ENST00000622641 72 ntBASIC2.42□□□□□ -2.02
RC3H2Q9HBD1 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 SNORD38.1-201ENST00000363863 68 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 RNU6-342P-201ENST00000384521 104 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 RNA5SP465-201ENST00000391195 109 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 RNU7-73P-201ENST00000458743 63 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 AC020891.4-201ENST00000605745 93 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
RC3H2Q9HBD1 RNU6-1229P-201ENST00000364295 107 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 RNU6-524P-201ENST00000384270 107 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 RNU6-613P-201ENST00000410412 108 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 RNA5SP261-201ENST00000410536 106 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 HMGN1P33-201ENST00000432945 451 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 RNU6-548P-201ENST00000517083 115 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 AC121758.2-201ENST00000553271 193 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 MIR5694-201ENST00000581190 76 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
RC3H2Q9HBD1 MIR219B-201ENST00000637023 88 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms