Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 Y_RNA.114-201ENST00000363265 113 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 RNA5SP48-201ENST00000363969 126 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 RNY1P6-201ENST00000384193 109 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 AL392103.1-201ENST00000447000 198 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 RNU6-1211P-201ENST00000459179 105 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 RNU6-240P-201ENST00000516098 97 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 Y_RNA.692-201ENST00000516627 105 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 MIR3910-1-201ENST00000580936 111 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 AL359821.1-201ENST00000605519 182 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 U7.2-201ENST00000607576 63 ntBASIC1.4□□□□□ -2.19
VPS50Q96JG6 RNU6-235P-201ENST00000362644 107 ntBASIC1.39□□□□□ -2.19
VPS50Q96JG6 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
VPS50Q96JG6 AC245047.7-201ENST00000440265 293 ntBASIC1.39□□□□□ -2.19
VPS50Q96JG6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS50Q96JG6 SNORA31.2-201ENST00000516019 134 ntBASIC1.39□□□□□ -2.19
VPS50Q96JG6 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 TRMT112P2-201ENST00000512910 132 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 IGKV1-22-201ENST00000524313 326 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 MIR6717-201ENST00000622747 73 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 AC021613.1-201ENST00000623880 111 ntBASIC1.38□□□□□ -2.19
VPS50Q96JG6 Y_RNA.280-201ENST00000364765 112 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 RNU6-690P-201ENST00000365242 106 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 RNU4-61P-201ENST00000411243 107 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 TMSB4XP3-201ENST00000445144 114 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 RNU6-1234P-201ENST00000516877 103 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 TUG1_4.1-201ENST00000619464 181 ntBASIC1.37□□□□□ -2.19
VPS50Q96JG6 MIR103A2-201ENST00000362154 78 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 Y_RNA.525-201ENST00000384570 113 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 RNU6-747P-201ENST00000390928 104 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 RNU6-241P-201ENST00000391148 104 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 RNU6-177P-201ENST00000411257 104 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 RNU6-1258P-201ENST00000516911 111 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 MIR8065-201ENST00000620577 100 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 Z97988.1-201ENST00000637697 135 ntBASIC1.36□□□□□ -2.19
VPS50Q96JG6 RNA5SP327-201ENST00000362494 101 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 RNU6-654P-201ENST00000364373 107 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 SNORA1.1-201ENST00000364671 133 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 RNU6-602P-201ENST00000411155 105 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 AC244023.1-201ENST00000426884 112 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 AL158147.1-201ENST00000443970 75 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 Y_RNA.757-201ENST00000578934 114 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 AC242498.1-201ENST00000604134 111 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
VPS50Q96JG6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS50Q96JG6 Y_RNA.4-201ENST00000362333 112 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 Y_RNA.218-201ENST00000364218 104 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 RNU6-910P-201ENST00000390844 107 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 SNORA75.2-201ENST00000391138 150 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 SNORA75.3-201ENST00000391231 150 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 RNA5SP95-201ENST00000410319 137 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 POLR2J4-204ENST00000418424 324 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 RNU2-35P-201ENST00000516446 142 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 AC133485.4-201ENST00000561835 220 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 AC138907.4-201ENST00000570107 226 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 MIR6841-201ENST00000637129 72 ntBASIC1.34□□□□□ -2.19
VPS50Q96JG6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 RNU6-81P-201ENST00000365608 104 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 SNORD12C-201ENST00000386307 89 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 RNA5SP144-201ENST00000410846 116 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 RNU6-781P-201ENST00000516377 101 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 RNU6-113P-201ENST00000516653 101 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS50Q96JG6 AC021443.1-201ENST00000604478 211 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 AL137067.1-201ENST00000615933 120 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 AL353770.2-201ENST00000620024 78 ntBASIC1.33□□□□□ -2.2
VPS50Q96JG6 SNORA22.1-201ENST00000362701 134 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 RNU6-959P-201ENST00000384671 107 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 RPS3AP1-201ENST00000413190 320 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 RNU7-107P-201ENST00000459121 61 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 RN7SKP19-201ENST00000516016 252 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS50Q96JG6 MIR4305-201ENST00000583252 102 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 MIR4781-201ENST00000585250 76 ntBASIC1.32□□□□□ -2.2
VPS50Q96JG6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
VPS50Q96JG6 Y_RNA.71-201ENST00000362892 104 ntBASIC1.31□□□□□ -2.2
VPS50Q96JG6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.31□□□□□ -2.2
VPS50Q96JG6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
VPS50Q96JG6 RNU6-396P-201ENST00000365369 105 ntBASIC1.31□□□□□ -2.2
VPS50Q96JG6 AL512326.2-201ENST00000426359 151 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms