Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MT-TF-201ENST00000387314 71 ntBASIC0.17□□□□□ -2.38
MSH6P52701 AL022718.1-201ENST00000412004 84 ntBASIC0.17□□□□□ -2.38
MSH6P52701 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.17□□□□□ -2.38
MSH6P52701 AL731563.1-201ENST00000442202 214 ntBASIC0.17□□□□□ -2.38
MSH6P52701 RNU6-448P-201ENST00000517052 107 ntBASIC0.17□□□□□ -2.38
MSH6P52701 AC131281.1-201ENST00000522984 164 ntBASIC0.17□□□□□ -2.38
MSH6P52701 AC037487.3-201ENST00000606668 112 ntBASIC0.17□□□□□ -2.38
MSH6P52701 Y_RNA.24-201ENST00000362508 103 ntBASIC0.16□□□□□ -2.38
MSH6P52701 Y_RNA.440-201ENST00000384120 114 ntBASIC0.16□□□□□ -2.38
MSH6P52701 RNU6-514P-201ENST00000384208 107 ntBASIC0.16□□□□□ -2.38
MSH6P52701 SNORA8.3-201ENST00000384679 139 ntBASIC0.16□□□□□ -2.38
MSH6P52701 Y_RNA.572-201ENST00000384757 98 ntBASIC0.16□□□□□ -2.38
MSH6P52701 MIR548I3-201ENST00000408378 149 ntBASIC0.16□□□□□ -2.38
MSH6P52701 RNU6-1190P-201ENST00000410811 104 ntBASIC0.16□□□□□ -2.38
MSH6P52701 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.16□□□□□ -2.38
MSH6P52701 AL138752.1-201ENST00000452964 351 ntBASIC0.16□□□□□ -2.38
MSH6P52701 SNORA40.15-201ENST00000516884 107 ntBASIC0.16□□□□□ -2.38
MSH6P52701 AC006006.1-201ENST00000603082 144 ntBASIC0.16□□□□□ -2.38
MSH6P52701 Y_RNA.804-201ENST00000615262 101 ntBASIC0.16□□□□□ -2.38
MSH6P52701 uc_338.16-201ENST00000621804 95 ntBASIC0.16□□□□□ -2.38
MSH6P52701 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
MSH6P52701 Y_RNA.19-201ENST00000362462 99 ntBASIC0.15□□□□□ -2.39
MSH6P52701 Y_RNA.229-201ENST00000364347 113 ntBASIC0.15□□□□□ -2.39
MSH6P52701 Y_RNA.276-201ENST00000364732 109 ntBASIC0.15□□□□□ -2.39
MSH6P52701 Y_RNA.634-201ENST00000364811 113 ntBASIC0.15□□□□□ -2.39
MSH6P52701 RNU6-1189P-201ENST00000383958 107 ntBASIC0.15□□□□□ -2.39
MSH6P52701 SNORA26-201ENST00000391286 122 ntBASIC0.15□□□□□ -2.39
MSH6P52701 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
MSH6P52701 RPL21P38-201ENST00000418090 167 ntBASIC0.15□□□□□ -2.39
MSH6P52701 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.15□□□□□ -2.39
MSH6P52701 RNU6-1299P-201ENST00000516316 100 ntBASIC0.15□□□□□ -2.39
MSH6P52701 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.15□□□□□ -2.39
MSH6P52701 MIR6717-201ENST00000622747 73 ntBASIC0.15□□□□□ -2.39
MSH6P52701 RNU6-740P-201ENST00000364734 105 ntBASIC0.14□□□□□ -2.39
MSH6P52701 RNU6-806P-201ENST00000365147 105 ntBASIC0.14□□□□□ -2.39
MSH6P52701 RNU6-484P-201ENST00000384016 107 ntBASIC0.14□□□□□ -2.39
MSH6P52701 RNU6-211P-201ENST00000384047 107 ntBASIC0.14□□□□□ -2.39
MSH6P52701 SNORA26.6-201ENST00000391256 115 ntBASIC0.14□□□□□ -2.39
MSH6P52701 SNRPGP8-201ENST00000454064 226 ntBASIC0.14□□□□□ -2.39
MSH6P52701 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.14□□□□□ -2.39
MSH6P52701 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
MSH6P52701 RNY3P15-201ENST00000516297 97 ntBASIC0.14□□□□□ -2.39
MSH6P52701 Y_RNA.7-201ENST00000362352 102 ntBASIC0.13□□□□□ -2.39
MSH6P52701 RNY3P5-201ENST00000384127 102 ntBASIC0.13□□□□□ -2.39
MSH6P52701 SNORA8.2-201ENST00000384372 139 ntBASIC0.13□□□□□ -2.39
MSH6P52701 RNU6-1143P-201ENST00000516125 104 ntBASIC0.13□□□□□ -2.39
MSH6P52701 RNA5SP153-201ENST00000516498 76 ntBASIC0.13□□□□□ -2.39
MSH6P52701 RNU6-988P-201ENST00000519081 107 ntBASIC0.13□□□□□ -2.39
MSH6P52701 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
MSH6P52701 SNORA25.18-201ENST00000607153 114 ntBASIC0.13□□□□□ -2.39
MSH6P52701 Y_RNA.16-201ENST00000362421 102 ntBASIC0.12□□□□□ -2.39
MSH6P52701 Y_RNA.26-201ENST00000362539 101 ntBASIC0.12□□□□□ -2.39
MSH6P52701 Y_RNA.91-201ENST00000363042 107 ntBASIC0.12□□□□□ -2.39
MSH6P52701 SNORD114-31-201ENST00000363219 75 ntBASIC0.12□□□□□ -2.39
MSH6P52701 AC022028.1-201ENST00000412054 408 ntBASIC0.12□□□□□ -2.39
MSH6P52701 MTRNR2L2-201ENST00000604882 87 ntBASIC0.12□□□□□ -2.39
MSH6P52701 AP001282.2-201ENST00000616149 309 ntBASIC0.12□□□□□ -2.39
MSH6P52701 MIR8066-201ENST00000617280 78 ntBASIC0.12□□□□□ -2.39
MSH6P52701 MTND4P29-201ENST00000503122 1372 ntBASIC0.11□□□□□ -2.39
MSH6P52701 Y_RNA.64-201ENST00000362845 102 ntBASIC0.11□□□□□ -2.39
MSH6P52701 Y_RNA.128-201ENST00000363391 112 ntBASIC0.11□□□□□ -2.39
MSH6P52701 SNORA36.1-201ENST00000363424 132 ntBASIC0.11□□□□□ -2.39
MSH6P52701 Y_RNA.509-201ENST00000384506 99 ntBASIC0.11□□□□□ -2.39
MSH6P52701 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
MSH6P52701 SNORD93-201ENST00000408813 74 ntBASIC0.11□□□□□ -2.39
MSH6P52701 SERF1AP1-201ENST00000514575 187 ntBASIC0.11□□□□□ -2.39
MSH6P52701 MIR4667-201ENST00000578933 66 ntBASIC0.11□□□□□ -2.39
MSH6P52701 AC097639.2-201ENST00000603159 172 ntBASIC0.11□□□□□ -2.39
MSH6P52701 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.11□□□□□ -2.39
MSH6P52701 MIR342-201ENST00000362212 99 ntBASIC0.1□□□□□ -2.39
MSH6P52701 Y_RNA.42-201ENST00000362660 108 ntBASIC0.1□□□□□ -2.39
MSH6P52701 Y_RNA.84-201ENST00000363011 104 ntBASIC0.1□□□□□ -2.39
MSH6P52701 Y_RNA.158-201ENST00000363651 101 ntBASIC0.1□□□□□ -2.39
MSH6P52701 Y_RNA.351-201ENST00000365436 96 ntBASIC0.1□□□□□ -2.39
MSH6P52701 SNORA1-201ENST00000384107 130 ntBASIC0.1□□□□□ -2.39
MSH6P52701 Y_RNA.455-201ENST00000384230 98 ntBASIC0.1□□□□□ -2.39
MSH6P52701 RNU6-1289P-201ENST00000384431 106 ntBASIC0.1□□□□□ -2.39
MSH6P52701 Y_RNA.552-201ENST00000384665 112 ntBASIC0.1□□□□□ -2.39
MSH6P52701 RNA5SP261-201ENST00000410536 106 ntBASIC0.1□□□□□ -2.39
MSH6P52701 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.1□□□□□ -2.39
MSH6P52701 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
MSH6P52701 AC133485.4-201ENST00000561835 220 ntBASIC0.1□□□□□ -2.39
MSH6P52701 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.1□□□□□ -2.39
MSH6P52701 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.1□□□□□ -2.39
MSH6P52701 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
MSH6P52701 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
MSH6P52701 MIR302B-201ENST00000362188 73 ntBASIC0.09□□□□□ -2.39
MSH6P52701 Y_RNA.210-201ENST00000364161 110 ntBASIC0.09□□□□□ -2.39
MSH6P52701 SNORA22B-201ENST00000383876 138 ntBASIC0.09□□□□□ -2.39
MSH6P52701 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.39
MSH6P52701 Y_RNA.430-201ENST00000384081 110 ntBASIC0.09□□□□□ -2.39
MSH6P52701 Y_RNA.567-201ENST00000384736 106 ntBASIC0.09□□□□□ -2.39
MSH6P52701 MIR604-201ENST00000384880 94 ntBASIC0.09□□□□□ -2.39
MSH6P52701 MT-TT-201ENST00000387460 66 ntBASIC0.09□□□□□ -2.39
MSH6P52701 RNU4-83P-201ENST00000410863 133 ntBASIC0.09□□□□□ -2.39
MSH6P52701 RNU7-45P-201ENST00000459460 63 ntBASIC0.09□□□□□ -2.39
MSH6P52701 AC113195.1-201ENST00000579952 141 ntBASIC0.09□□□□□ -2.39
MSH6P52701 RNU6-653P-201ENST00000363074 106 ntBASIC0.08□□□□□ -2.4
MSH6P52701 Y_RNA.275-201ENST00000364726 110 ntBASIC0.08□□□□□ -2.4
MSH6P52701 Y_RNA.304-201ENST00000365011 112 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms