Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 SNORA24-201ENST00000384096 131 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 SNORA40-201ENST00000388090 126 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 AL603914.1-201ENST00000401964 204 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 RNU6-257P-201ENST00000410238 98 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 AL392103.1-201ENST00000447000 198 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 RNU5E-3P-201ENST00000515913 68 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 RNU7-53P-201ENST00000516705 60 ntBASIC1.43□□□□□ -2.18
HOXD12P35452 RNU6-42P-201ENST00000384165 107 ntBASIC1.42□□□□□ -2.18
HOXD12P35452 MTND4LP9-201ENST00000427694 174 ntBASIC1.42□□□□□ -2.18
HOXD12P35452 Y_RNA.692-201ENST00000516627 105 ntBASIC1.42□□□□□ -2.18
HOXD12P35452 MIR618-201ENST00000385287 98 ntBASIC1.41□□□□□ -2.18
HOXD12P35452 RNA5SP220-201ENST00000516298 104 ntBASIC1.41□□□□□ -2.18
HOXD12P35452 RNU6-165P-201ENST00000517170 99 ntBASIC1.41□□□□□ -2.18
HOXD12P35452 AL022345.2-201ENST00000606307 135 ntBASIC1.41□□□□□ -2.18
HOXD12P35452 AC011603.4-201ENST00000611325 277 ntBASIC1.41□□□□□ -2.18
HOXD12P35452 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
HOXD12P35452 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
HOXD12P35452 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
HOXD12P35452 RNU6-913P-201ENST00000390913 95 ntBASIC1.4□□□□□ -2.19
HOXD12P35452 Y_RNA.586-201ENST00000391146 98 ntBASIC1.4□□□□□ -2.19
HOXD12P35452 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.4□□□□□ -2.19
HOXD12P35452 snoU13.16-201ENST00000459350 104 ntBASIC1.4□□□□□ -2.19
HOXD12P35452 U7.2-201ENST00000607576 63 ntBASIC1.4□□□□□ -2.19
HOXD12P35452 TUG1_4.1-201ENST00000619464 181 ntBASIC1.4□□□□□ -2.19
HOXD12P35452 SNORA25.3-201ENST00000363205 127 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 RNA5SP48-201ENST00000363969 126 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 TMSB4XP3-201ENST00000445144 114 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 RNU7-73P-201ENST00000458743 63 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 snoU13.25-201ENST00000458945 104 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 AL133373.1-201ENST00000497098 94 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 Y_RNA.757-201ENST00000578934 114 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 MIR3121-201ENST00000579680 77 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 HSPE1P19-201ENST00000603327 295 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 AL078603.1-201ENST00000603824 313 ntBASIC1.39□□□□□ -2.19
HOXD12P35452 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
HOXD12P35452 Y_RNA.294-201ENST00000364916 102 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 RNU4-61P-201ENST00000411243 107 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 RNU6-1211P-201ENST00000459179 105 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 Y_RNA.651-201ENST00000459380 103 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 RNU7-45P-201ENST00000459460 63 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 SNORA31.4-201ENST00000516049 129 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 MIR548AO-201ENST00000579992 96 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 MIR3910-1-201ENST00000580936 111 ntBASIC1.38□□□□□ -2.19
HOXD12P35452 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
HOXD12P35452 RNU6-53P-201ENST00000365367 106 ntBASIC1.37□□□□□ -2.19
HOXD12P35452 RNY1P6-201ENST00000384193 109 ntBASIC1.37□□□□□ -2.19
HOXD12P35452 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
HOXD12P35452 RNU6-349P-201ENST00000362402 107 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 Y_RNA.114-201ENST00000363265 113 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 RNU4-16P-201ENST00000364737 141 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 RNU6-690P-201ENST00000365242 106 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 RNU6-1190P-201ENST00000410811 104 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 RNU6-113P-201ENST00000516653 101 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 RNU6-971P-201ENST00000516920 106 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 AL020996.3-201ENST00000606617 222 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 MIR8055-201ENST00000610739 97 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
HOXD12P35452 SNORD114-22-201ENST00000365423 72 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 MIR539-201ENST00000365690 78 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 Y_RNA.540-201ENST00000384638 111 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 HMGN1P33-201ENST00000432945 451 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 AC048334.1-201ENST00000477975 159 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 RNU6-240P-201ENST00000516098 97 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 MIR3152-201ENST00000579801 74 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 AC021613.1-201ENST00000623880 111 ntBASIC1.35□□□□□ -2.19
HOXD12P35452 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HOXD12P35452 RNA5SP264-201ENST00000363115 107 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 SNORA1.1-201ENST00000364671 133 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 RNU6-1319P-201ENST00000390855 104 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 RNU6-747P-201ENST00000390928 104 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 RNU6-241P-201ENST00000391148 104 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 RNA5SP261-201ENST00000410536 106 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 RNU6-177P-201ENST00000411257 104 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 RNU6-1054P-201ENST00000411293 104 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 AC108081.1-201ENST00000604358 221 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 MIR6717-201ENST00000622747 73 ntBASIC1.34□□□□□ -2.19
HOXD12P35452 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HOXD12P35452 RNU6-235P-201ENST00000362644 107 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 SNORA26.6-201ENST00000391256 115 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 AC245047.7-201ENST00000440265 293 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 SNORA31.2-201ENST00000516019 134 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 RNU6-789P-201ENST00000517105 102 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 SNORA70.22-201ENST00000517160 124 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 AC133485.4-201ENST00000561835 220 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 AC138907.4-201ENST00000570107 226 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 PRELID3BP2-201ENST00000605362 201 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 AC132825.6-201ENST00000638861 357 ntBASIC1.33□□□□□ -2.2
HOXD12P35452 MIR103A2-201ENST00000362154 78 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 RNU6-647P-201ENST00000364243 107 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 Y_RNA.366-201ENST00000365540 102 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 RNU6-81P-201ENST00000365608 104 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms