Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL133373.1-201ENST00000497098 94 ntBASIC1.57□□□□□ -2.16
SMARCA1P28370 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
SMARCA1P28370 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.57□□□□□ -2.16
SMARCA1P28370 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
SMARCA1P28370 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
SMARCA1P28370 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
SMARCA1P28370 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
SMARCA1P28370 MIR302B-201ENST00000362188 73 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 MIR150-201ENST00000385048 84 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 MIR1302-7-201ENST00000408841 72 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 RNU5E-3P-201ENST00000515913 68 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 Y_RNA.692-201ENST00000516627 105 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 MIR3910-1-201ENST00000580936 111 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 MIR3660-201ENST00000584845 100 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 AL078603.1-201ENST00000603824 313 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 AL020996.3-201ENST00000606617 222 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 U7.2-201ENST00000607576 63 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 MIR8055-201ENST00000610739 97 ntBASIC1.56□□□□□ -2.16
SMARCA1P28370 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SMARCA1P28370 RNA5SP48-201ENST00000363969 126 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 MIR758-201ENST00000390227 88 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 AC090844.1-201ENST00000422019 156 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 HMGN1P33-201ENST00000432945 451 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 AC048334.1-201ENST00000477975 159 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 RNA5SP61-201ENST00000516453 100 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 AC108081.1-201ENST00000604358 221 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 TUG1_4.1-201ENST00000619464 181 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 MIR8065-201ENST00000620577 100 ntBASIC1.55□□□□□ -2.16
SMARCA1P28370 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SMARCA1P28370 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SMARCA1P28370 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SMARCA1P28370 Y_RNA.280-201ENST00000364765 112 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 MIR7-2-201ENST00000384970 110 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 SNORA26.6-201ENST00000391256 115 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
SMARCA1P28370 RNU6-1054P-201ENST00000411293 104 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 TMSB4XP3-201ENST00000445144 114 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 RNU6-971P-201ENST00000516920 106 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 PRELID3BP2-201ENST00000605362 201 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 AC011603.4-201ENST00000611325 277 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 MIR6734-201ENST00000621166 68 ntBASIC1.54□□□□□ -2.16
SMARCA1P28370 Y_RNA.114-201ENST00000363265 113 ntBASIC1.53□□□□□ -2.16
SMARCA1P28370 RNU6-42P-201ENST00000384165 107 ntBASIC1.53□□□□□ -2.16
SMARCA1P28370 RNY1P6-201ENST00000384193 109 ntBASIC1.53□□□□□ -2.16
SMARCA1P28370 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
SMARCA1P28370 RNU4-61P-201ENST00000411243 107 ntBASIC1.53□□□□□ -2.16
SMARCA1P28370 AC021613.1-201ENST00000623880 111 ntBASIC1.53□□□□□ -2.16
SMARCA1P28370 RNU4-16P-201ENST00000364737 141 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 RNU6-1319P-201ENST00000390855 104 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 RNU6-747P-201ENST00000390928 104 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 RNU6-241P-201ENST00000391148 104 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 MIR1185-1-201ENST00000408598 86 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 RNU6-177P-201ENST00000411257 104 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 AC245047.7-201ENST00000440265 293 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 AL158147.1-201ENST00000443970 75 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 RNU6-240P-201ENST00000516098 97 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 Y_RNA.757-201ENST00000578934 114 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 MIR6717-201ENST00000622747 73 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 Z97988.1-201ENST00000637697 135 ntBASIC1.52□□□□□ -2.17
SMARCA1P28370 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
SMARCA1P28370 RNU6-690P-201ENST00000365242 106 ntBASIC1.51□□□□□ -2.17
SMARCA1P28370 RNU6-81P-201ENST00000365608 104 ntBASIC1.51□□□□□ -2.17
SMARCA1P28370 RNU6-1211P-201ENST00000459179 105 ntBASIC1.51□□□□□ -2.17
SMARCA1P28370 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
SMARCA1P28370 RNU6-113P-201ENST00000516653 101 ntBASIC1.51□□□□□ -2.17
SMARCA1P28370 Y_RNA.363-201ENST00000365529 113 ntBASIC1.5□□□□□ -2.17
SMARCA1P28370 Y_RNA.366-201ENST00000365540 102 ntBASIC1.5□□□□□ -2.17
SMARCA1P28370 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
SMARCA1P28370 IGKV1-22-201ENST00000524313 326 ntBASIC1.5□□□□□ -2.17
SMARCA1P28370 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
SMARCA1P28370 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
SMARCA1P28370 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SMARCA1P28370 RNU6-235P-201ENST00000362644 107 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 SNORA1.1-201ENST00000364671 133 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 RNU6-392P-201ENST00000364926 101 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 POLR2J4-204ENST00000418424 324 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 RNA5SP220-201ENST00000516298 104 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 AC068338.1-201ENST00000565567 176 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 MIR6516-201ENST00000630554 81 ntBASIC1.49□□□□□ -2.17
SMARCA1P28370 MIR103A2-201ENST00000362154 78 ntBASIC1.48□□□□□ -2.17
SMARCA1P28370 MIR539-201ENST00000365690 78 ntBASIC1.48□□□□□ -2.17
SMARCA1P28370 AC133485.4-201ENST00000561835 220 ntBASIC1.48□□□□□ -2.17
SMARCA1P28370 AC138907.4-201ENST00000570107 226 ntBASIC1.48□□□□□ -2.17
SMARCA1P28370 MIR6841-201ENST00000637129 72 ntBASIC1.48□□□□□ -2.17
SMARCA1P28370 AC132825.6-201ENST00000638861 357 ntBASIC1.48□□□□□ -2.17
SMARCA1P28370 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
SMARCA1P28370 Y_RNA.218-201ENST00000364218 104 ntBASIC1.47□□□□□ -2.17
SMARCA1P28370 Y_RNA.430-201ENST00000384081 110 ntBASIC1.47□□□□□ -2.17
SMARCA1P28370 RNA5SP144-201ENST00000410846 116 ntBASIC1.47□□□□□ -2.17
SMARCA1P28370 RNU6-602P-201ENST00000411155 105 ntBASIC1.47□□□□□ -2.17
SMARCA1P28370 AC244023.1-201ENST00000426884 112 ntBASIC1.47□□□□□ -2.17
SMARCA1P28370 RNU6-406P-201ENST00000516470 107 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms