Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.25□□□□□ -2.21
NR1D1P20393 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 Y_RNA.370-201ENST00000365589 108 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
NR1D1P20393 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.25□□□□□ -2.21
NR1D1P20393 RPS29P1-201ENST00000465274 159 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 Y_RNA.686-201ENST00000516548 134 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 RNU6-1149P-201ENST00000516810 97 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
NR1D1P20393 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.25□□□□□ -2.21
NR1D1P20393 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.25□□□□□ -2.21
NR1D1P20393 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.25□□□□□ -2.21
NR1D1P20393 SNORD18B-201ENST00000365659 72 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 MIR539-201ENST00000365690 78 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 SNORA70.7-201ENST00000384159 133 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 Y_RNA.537-201ENST00000384626 109 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 RNU6-959P-201ENST00000384671 107 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 MIR520E-201ENST00000384867 87 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 MIR520C-201ENST00000385005 87 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 MTATP6P21-201ENST00000440681 189 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 RNU2-13P-201ENST00000515909 113 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 RNU7-181P-201ENST00000517234 74 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 MIR548AR-201ENST00000582191 57 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 MIR6788-201ENST00000618842 66 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
NR1D1P20393 Y_RNA.68-201ENST00000362881 102 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 Y_RNA.241-201ENST00000364470 117 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 Y_RNA.280-201ENST00000364765 112 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 SNORA27-201ENST00000384323 126 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 SNORA19-201ENST00000384737 128 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 RPL39P39-201ENST00000455840 151 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 RPS26P48-201ENST00000491713 339 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 Y_RNA.690-201ENST00000516603 95 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 Y_RNA.692-201ENST00000516627 105 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 RNU6-922P-201ENST00000516753 99 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 MIR3121-201ENST00000579680 77 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
NR1D1P20393 RNU6-309P-201ENST00000364573 106 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 Y_RNA.494-201ENST00000384432 111 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 RNU7-80P-201ENST00000459562 61 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 RNU6-971P-201ENST00000516920 106 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 Y_RNA.757-201ENST00000578934 114 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.22□□□□□ -2.21
NR1D1P20393 AC011603.4-201ENST00000611325 277 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 U2.22-201ENST00000636441 106 ntBASIC1.22□□□□□ -2.21
NR1D1P20393 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
NR1D1P20393 Y_RNA.351-201ENST00000365436 96 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 SNORA24-201ENST00000384096 131 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 Y_RNA.454-201ENST00000384224 113 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 RNU6-1117P-201ENST00000384525 104 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 SNORD28B-201ENST00000390993 75 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 Y_RNA.651-201ENST00000459380 103 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 RNU7-96P-201ENST00000459535 64 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 RPS29P24-201ENST00000486345 171 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 RNU6-113P-201ENST00000516653 101 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 RN7SL793P-201ENST00000583259 296 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 AL022345.2-201ENST00000606307 135 ntBASIC1.21□□□□□ -2.22
NR1D1P20393 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
NR1D1P20393 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.2□□□□□ -2.22
NR1D1P20393 RNU6-508P-201ENST00000363231 103 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 Y_RNA.218-201ENST00000364218 104 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 AL606753.1-201ENST00000427435 87 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 RNU6-1211P-201ENST00000459179 105 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 RNU6-998P-201ENST00000515894 101 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 SNORD111.1-201ENST00000516421 86 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 AC091932.4-201ENST00000623386 200 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 AC008133.2-201ENST00000624540 351 ntBASIC1.2□□□□□ -2.22
NR1D1P20393 Y_RNA.114-201ENST00000363265 113 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 Y_RNA.294-201ENST00000364916 102 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 Y_RNA.433-201ENST00000384089 102 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 RNU6-80P-201ENST00000384195 107 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 MIR548J-201ENST00000408833 112 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 AL158147.1-201ENST00000443970 75 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 RNU7-53P-201ENST00000516705 60 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 MIR4791-201ENST00000607666 84 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 AC243994.1-201ENST00000618627 109 ntBASIC1.19□□□□□ -2.22
NR1D1P20393 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NR1D1P20393 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
NR1D1P20393 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
NR1D1P20393 RNU6-349P-201ENST00000362402 107 ntBASIC1.18□□□□□ -2.22
NR1D1P20393 Y_RNA.71-201ENST00000362892 104 ntBASIC1.18□□□□□ -2.22
NR1D1P20393 RNU6-647P-201ENST00000364243 107 ntBASIC1.18□□□□□ -2.22
NR1D1P20393 RNU1-133P-201ENST00000364867 167 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms