Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MIR1287-201ENST00000408492 90 ntBASIC1.13□□□□□ -2.23
ZIC3O60481 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
ZIC3O60481 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
ZIC3O60481 SEPT14P17-201ENST00000617978 177 ntBASIC1.13□□□□□ -2.23
ZIC3O60481 MIR6717-201ENST00000622747 73 ntBASIC1.13□□□□□ -2.23
ZIC3O60481 MIR26B-201ENST00000362251 77 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-396P-201ENST00000365369 105 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 Y_RNA.488-201ENST00000384403 102 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-125P-201ENST00000384505 107 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-1319P-201ENST00000390855 104 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-747P-201ENST00000390928 104 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-241P-201ENST00000391148 104 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-177P-201ENST00000411257 104 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 MTATP6P21-201ENST00000440681 189 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 Y_RNA.651-201ENST00000459380 103 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-346P-201ENST00000516288 111 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 MIR2115-201ENST00000516657 100 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 HSPE1P19-201ENST00000603327 295 ntBASIC1.12□□□□□ -2.23
ZIC3O60481 RNU6-349P-201ENST00000362402 107 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 RNU6-508P-201ENST00000363231 103 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 RNU6-309P-201ENST00000364573 106 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 SNORA1.1-201ENST00000364671 133 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 SNORD18B-201ENST00000365659 72 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 AC244023.1-201ENST00000426884 112 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 AC242498.1-201ENST00000604134 111 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 MIR8070-201ENST00000616510 88 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 AC021613.1-201ENST00000623880 111 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 AP001340.1-201ENST00000624405 217 ntBASIC1.11□□□□□ -2.23
ZIC3O60481 RNU6-654P-201ENST00000364373 107 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 RNU6-392P-201ENST00000364926 101 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 SNORA25.9-201ENST00000365087 128 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 Y_RNA.420-201ENST00000384043 110 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 Y_RNA.430-201ENST00000384081 110 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 RNY1P6-201ENST00000384193 109 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ZIC3O60481 RNU6-613P-201ENST00000410412 108 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 RNA5SP261-201ENST00000410536 106 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 RNU6-602P-201ENST00000411155 105 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 RNU6-426P-201ENST00000516464 97 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 Y_RNA.690-201ENST00000516603 95 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
ZIC3O60481 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.1□□□□□ -2.23
ZIC3O60481 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
ZIC3O60481 RNU6-915P-201ENST00000364943 103 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 MT-TN-201ENST00000387400 73 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 RPS3AP1-201ENST00000413190 320 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.09□□□□□ -2.23
ZIC3O60481 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.09□□□□□ -2.23
ZIC3O60481 RNA5SP272-201ENST00000516095 111 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 MIR3152-201ENST00000579801 74 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 MIR6841-201ENST00000637129 72 ntBASIC1.09□□□□□ -2.23
ZIC3O60481 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.08□□□□□ -2.24
ZIC3O60481 Y_RNA.330-201ENST00000365230 109 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 RNU6-53P-201ENST00000365367 106 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 RNU6-746P-201ENST00000384112 109 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 SNORA20-201ENST00000384662 132 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 Y_RNA.703-201ENST00000516846 111 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 MIR3133-201ENST00000583157 78 ntBASIC1.08□□□□□ -2.24
ZIC3O60481 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
ZIC3O60481 AC008163.1-202ENST00000636004 2889 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 MIR377-201ENST00000362145 69 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 RNU4-16P-201ENST00000364737 141 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 RNU6-580P-201ENST00000365159 107 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 Y_RNA.568-201ENST00000384742 113 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 RNA5SP95-201ENST00000410319 137 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.07□□□□□ -2.24
ZIC3O60481 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 AP001328.1-201ENST00000528550 176 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 MIR3121-201ENST00000579680 77 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 MIR4264-201ENST00000583520 66 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 AC091895.1-201ENST00000624494 256 ntBASIC1.07□□□□□ -2.24
ZIC3O60481 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
ZIC3O60481 RNU6-774P-201ENST00000363238 107 ntBASIC1.06□□□□□ -2.24
ZIC3O60481 Y_RNA.343-201ENST00000365354 112 ntBASIC1.06□□□□□ -2.24
ZIC3O60481 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
ZIC3O60481 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
ZIC3O60481 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
ZIC3O60481 AP000753.3-201ENST00000604083 169 ntBASIC1.06□□□□□ -2.24
ZIC3O60481 AC010332.2-201ENST00000613083 1904 ntBASIC1.06□□□□□ -2.24
ZIC3O60481 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
ZIC3O60481 SNORA22.1-201ENST00000362701 134 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 Y_RNA.168-201ENST00000363740 102 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 RNU6-690P-201ENST00000365242 106 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 Y_RNA.354-201ENST00000365448 111 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 RNU6-205P-201ENST00000390858 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms