Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 Y_RNA.416-201ENST00000384014 113 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 SNORD38B-201ENST00000384690 67 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 MIR616-201ENST00000385293 97 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 RNU2-55P-201ENST00000411146 174 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 AC244023.1-201ENST00000426884 112 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 RNU7-73P-201ENST00000458743 63 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-977P-201ENST00000516411 103 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 AC242498.1-201ENST00000604134 111 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.812-201ENST00000610788 101 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.784-201ENST00000613803 101 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.787-201ENST00000616522 101 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.780-201ENST00000617336 101 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.801-201ENST00000619005 101 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 SNORD38B-202ENST00000625943 69 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 SNORA63C-201ENST00000364578 129 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 SNORA1.1-201ENST00000364671 133 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 RNY3P5-201ENST00000384127 102 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.459-201ENST00000384251 102 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-472P-201ENST00000384299 107 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 MIR520F-201ENST00000384824 87 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 MIR548F4-201ENST00000408515 105 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 RNU2-11P-201ENST00000459191 187 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
ATG4BQ9Y4P1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.145-201ENST00000363527 102 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.277-201ENST00000364754 102 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-1011P-201ENST00000384668 107 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 RNA5SP436-201ENST00000516020 115 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 RNA5SP153-201ENST00000516498 76 ntBASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
ATG4BQ9Y4P1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.47-201ENST00000362697 108 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 RNU4-17P-201ENST00000365598 141 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 SNORA36.2-201ENST00000384004 127 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 SNORA1-201ENST00000384107 130 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 MIR598-201ENST00000384868 97 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 MIR548I3-201ENST00000408378 149 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 RNU7-96P-201ENST00000459535 64 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 AC018659.1-201ENST00000551083 169 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 MIR4643-201ENST00000577473 78 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 MIR4282-201ENST00000583613 67 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 MIR8055-201ENST00000610739 97 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 uc_338.6-201ENST00000613544 171 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 MIR6740-201ENST00000618268 113 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 Z97988.1-201ENST00000637697 135 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 AC010332.2-201ENST00000613083 1904 ntBASIC0.57□□□□□ -2.32
ATG4BQ9Y4P1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 MIR302B-201ENST00000362188 73 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-369P-201ENST00000362515 102 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 SNORD77.3-201ENST00000391113 65 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-381P-201ENST00000391259 108 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 SNORA79-201ENST00000408376 140 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 RNU2-38P-201ENST00000410856 79 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-998P-201ENST00000515894 101 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-561P-201ENST00000516222 102 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 AL117187.1-201ENST00000555482 181 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 MIR3129-201ENST00000581095 76 ntBASIC0.56□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-653P-201ENST00000363074 106 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.149-201ENST00000363558 117 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-728P-201ENST00000365375 104 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 MIR588-201ENST00000384900 83 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-602P-201ENST00000411155 105 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 AC097639.2-201ENST00000603159 172 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 AC020891.4-201ENST00000605745 93 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 AL442067.1-201ENST00000613261 223 ntBASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.76-201ENST00000362931 109 ntBASIC0.54□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-694P-201ENST00000364071 147 ntBASIC0.54□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.54□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-342P-201ENST00000384521 104 ntBASIC0.54□□□□□ -2.32
ATG4BQ9Y4P1 RNU6-738P-201ENST00000384531 106 ntBASIC0.54□□□□□ -2.32
ATG4BQ9Y4P1 MIR4676-201ENST00000583078 72 ntBASIC0.54□□□□□ -2.32
ATG4BQ9Y4P1 MIR6513-201ENST00000621188 64 ntBASIC0.54□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.292-201ENST00000364904 97 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 Y_RNA.308-201ENST00000365043 101 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms