Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 Y_RNA.42-201ENST00000362660 108 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-340P-201ENST00000364005 107 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 RN7SL75P-201ENST00000461926 281 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 MIR3675-201ENST00000583661 73 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 MIR8053-201ENST00000613344 75 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 AL662814.1-201ENST00000617364 121 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 AL161722.3-201ENST00000605789 2983 ntBASIC3.86□□□□□ -1.79
TRIM35Q9UPQ4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-1031P-201ENST00000384773 107 ntBASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 AC245166.1-201ENST00000521012 253 ntBASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM35Q9UPQ4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 MIR337-201ENST00000362281 93 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 Y_RNA.371-201ENST00000365591 113 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 SNORD38B-201ENST00000384690 67 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 MIR516A2-201ENST00000384888 90 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 MIR516A1-201ENST00000385033 90 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 EIF4BP1-201ENST00000554881 351 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 SNORD38B-202ENST00000625943 69 ntBASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM35Q9UPQ4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 UQCRHP3-201ENST00000451503 251 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 RN7SL633P-201ENST00000488974 297 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 SNORA74.3-201ENST00000517108 154 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 AC005786.1-201ENST00000588553 154 ntBASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM35Q9UPQ4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 SNORA68.1-201ENST00000364537 132 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 HMGN2P39-201ENST00000398005 273 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 RNA5SP274-201ENST00000410484 108 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 AC008133.2-201ENST00000624540 351 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 U6.109-201ENST00000636749 87 ntBASIC3.82□□□□□ -1.8
TRIM35Q9UPQ4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-1216P-201ENST00000362590 107 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 Y_RNA.236-201ENST00000364427 111 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 SNORD116-24-201ENST00000384549 92 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 RNU2-7P-201ENST00000410794 178 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 AC069503.3-201ENST00000618674 145 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 MIR7153-201ENST00000637758 57 ntBASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM35Q9UPQ4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 RNA5SP139-201ENST00000364340 117 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 RNU1-109P-201ENST00000383960 147 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 AC003685.2-201ENST00000422795 395 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 RNU7-43P-201ENST00000516554 64 ntBASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM35Q9UPQ4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SNORD115-3-201ENST00000363100 82 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 Y_RNA.119-201ENST00000363301 96 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-829P-201ENST00000363700 112 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SNORA80A-201ENST00000363922 136 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 Y_RNA.207-201ENST00000364142 106 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SNORD115-22-201ENST00000364456 82 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-1051P-201ENST00000365471 102 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 AL023284.1-201ENST00000403956 276 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RPS29P6-201ENST00000438196 145 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 AC245517.4-201ENST00000448601 281 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 RPS27P29-201ENST00000463110 252 ntBASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TRIM35Q9UPQ4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 HMGN2P7-201ENST00000456186 273 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 SNORA59A-201ENST00000459326 152 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 RNU6-711P-201ENST00000517255 106 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 AC079600.2-201ENST00000550076 130 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 AC121758.2-201ENST00000553271 193 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 MIR548AO-201ENST00000579992 96 ntBASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM35Q9UPQ4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 SNORD45.1-201ENST00000363181 77 ntBASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 AC019129.1-201ENST00000403786 261 ntBASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 AL513423.1-201ENST00000621695 132 ntBASIC3.77□□□□□ -1.81
TRIM35Q9UPQ4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM35Q9UPQ4 RNU6-957P-201ENST00000363652 99 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms